RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 ZNF256Q9Y2P7 627 aaPredicted RBP14.57□□□□□ -0.08
ACTN4-208ENST00000497637 C7orf71A4D174 169 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 MED14OSP0DP75 135 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 HLA-DRB4P13762 266 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 ANXA2RQ3ZCQ2 193 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 PDZD11Q5EBL8 140 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 ZFAND6Q6FIF0 208 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 AMTNQ6UX39 209 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 HIST1H2BLQ99880 126 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 HLA-DRB4X5D2U9 266 aa14.56□□□□□ -0.08
ACTN4-208ENST00000497637 IGHV4-4A0A075B6R2 117 aa14.55□□□□□ -0.08
ACTN4-208ENST00000497637 KNCNA6PVL3 124 aa14.55□□□□□ -0.08
ACTN4-208ENST00000497637 CACNG7P62955 275 aa14.55□□□□□ -0.08
ACTN4-208ENST00000497637 MAP6D1Q9H9H5 199 aa14.55□□□□□ -0.08
ACTN4-208ENST00000497637 HUWE1Q7Z6Z7 4374 aaKnown RBP14.55□□□□□ -0.08
ACTN4-208ENST00000497637 H3BMM0 161 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 NUPR1O60356 82 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 AMBPP02760 352 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 NTF3P20783 257 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 LINC00310P59036 64 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 TWIST1Q15672 202 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 FAM104BQ5XKR9 115 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 LINC00518Q8N0U6 118 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 OR2K2Q8NGT1 345 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 C18orf32Q8TCD1 76 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 NAGKQ9UJ70 344 aa14.54□□□□□ -0.08
ACTN4-208ENST00000497637 MUC21A0A0G2JKD1 596 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 MUC21A0A140T8X8 626 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 ZNF324O75467 553 aaPredicted RBP14.53□□□□□ -0.08
ACTN4-208ENST00000497637 SERF1AO75920 110 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 FABP4P15090 132 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 ASIPP42127 132 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 CDKN1BP46527 198 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 CMC4P56277 68 aaPredicted RBP14.53□□□□□ -0.08
ACTN4-208ENST00000497637 MUC21Q5SSG8 566 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 DMRTA1Q5VZB9 504 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 TMEM191AQ9H0A3 160 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 CSMD3Q7Z407 3707 aa14.53□□□□□ -0.08
ACTN4-208ENST00000497637 IGKV3-20P01619 116 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 OR10D4PQ8NGN7 298 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 TMEM18Q96B42 140 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 KCNS1Q96KK3 526 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 CLUHP3Q96NS8 147 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 ZMAT4Q9H898 229 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 HERC2O95714 4834 aa14.52□□□□□ -0.09
ACTN4-208ENST00000497637 IGLV1-51P01701 117 aa14.51□□□□□ -0.09
ACTN4-208ENST00000497637 TDRG1Q3Y452 100 aa14.51□□□□□ -0.09
ACTN4-208ENST00000497637 SCRT2Q9NQ03 307 aa14.51□□□□□ -0.09
ACTN4-208ENST00000497637 TRAV12-3A0A0B4J271 114 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 H3BVH4 76 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 SAP30O75446 220 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 SMIM6P0DI80 62 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 SSTP61278 116 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 IQCJQ1A5X6 159 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 SPINK13Q1W4C9 94 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 FAM159AQ6UWV7 190 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 OR10AG1Q8NH19 301 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 PACRGQ96M98 296 aaPredicted RBP14.5□□□□□ -0.09
ACTN4-208ENST00000497637 MSRB1Q9NZV6 116 aa14.5□□□□□ -0.09
ACTN4-208ENST00000497637 RBMY1BA6NDE4 496 aaKnown RBP14.49□□□□□ -0.09
ACTN4-208ENST00000497637 RBMY1EA6NEQ0 496 aaKnown RBP14.49□□□□□ -0.09
ACTN4-208ENST00000497637 M0R2Z0 102 aa14.49□□□□□ -0.09
ACTN4-208ENST00000497637 GNRH2O43555 120 aa14.49□□□□□ -0.09
ACTN4-208ENST00000497637 RBMY1DP0C7P1 496 aaKnown RBP14.49□□□□□ -0.09
ACTN4-208ENST00000497637 S100A4P26447 101 aaKnown RBP14.49□□□□□ -0.09
ACTN4-208ENST00000497637 ODF3L2Q3SX64 289 aa14.49□□□□□ -0.09
ACTN4-208ENST00000497637 SBSPONQ8IVN8 264 aa14.49□□□□□ -0.09
ACTN4-208ENST00000497637 AMN1Q8IY45 258 aa14.49□□□□□ -0.09
ACTN4-208ENST00000497637 STARD9Q9P2P6 4700 aa14.48□□□□□ -0.09
ACTN4-208ENST00000497637 MRPL51Q4U2R6 128 aaKnown RBP14.48□□□□□ -0.09
ACTN4-208ENST00000497637 RYR1P21817 5038 aa14.48□□□□□ -0.09
ACTN4-208ENST00000497637 TRAV12-2A0A075B6T6 113 aa14.47□□□□□ -0.09
ACTN4-208ENST00000497637 RNASE3P12724 160 aaKnown RBP14.47□□□□□ -0.09
ACTN4-208ENST00000497637 ZNF124Q15973 351 aa14.47□□□□□ -0.09
ACTN4-208ENST00000497637 C9orf66Q5T8R8 295 aa14.47□□□□□ -0.09
ACTN4-208ENST00000497637 SPANXN1Q5VSR9 72 aa14.47□□□□□ -0.09
ACTN4-208ENST00000497637 RNF185Q96GF1 192 aa14.47□□□□□ -0.09
ACTN4-208ENST00000497637 IGHV1OR15-1A0A075B7D0 117 aa14.46□□□□□ -0.09
ACTN4-208ENST00000497637 OR11H12B2RN74 326 aa14.46□□□□□ -0.09
ACTN4-208ENST00000497637 RAB4AP20338 218 aa14.46□□□□□ -0.09
ACTN4-208ENST00000497637 SMIM15Q7Z3B0 74 aa14.46□□□□□ -0.09
ACTN4-208ENST00000497637 FAM110AQ9BQ89 295 aa14.46□□□□□ -0.09
ACTN4-208ENST00000497637 CRXO43186 299 aaPredicted RBP14.45□□□□□ -0.1
ACTN4-208ENST00000497637 NXPH4O95158 308 aa14.45□□□□□ -0.1
ACTN4-208ENST00000497637 NIT1Q86X76 327 aa14.45□□□□□ -0.1
ACTN4-208ENST00000497637 ORMDL3Q8N138 153 aa14.45□□□□□ -0.1
ACTN4-208ENST00000497637 TIMM8BQ9Y5J9 83 aaPredicted RBP14.45□□□□□ -0.1
ACTN4-208ENST00000497637 PPBPP02775 128 aa14.44□□□□□ -0.1
ACTN4-208ENST00000497637 C12orf57Q99622 126 aa14.44□□□□□ -0.1
ACTN4-208ENST00000497637 PHLDA3Q9Y5J5 127 aa14.44□□□□□ -0.1
ACTN4-208ENST00000497637 IGHV3-16A0A0C4DH30 117 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 D6R8Y8 96 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 CD7P09564 240 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 FXYD7P58549 80 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 CHCHD1Q96BP2 118 aaKnown RBP14.43□□□□□ -0.1
ACTN4-208ENST00000497637 URB1-AS1Q96HZ7 61 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 C9orf85Q96MD7 179 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 PRELID3AQ96N28 172 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 SAMD10Q9BYL1 202 aa14.43□□□□□ -0.1
ACTN4-208ENST00000497637 CKS2P33552 79 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms