RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 C7orf71A4D174 169 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 M0R381 172 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 ASIPP42127 132 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
UBXN11-216ENST00000496466 ZANQ9Y493 2812 aa11.25□□□□□ -0.61
UBXN11-216ENST00000496466 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
UBXN11-216ENST00000496466 GAGE10A6NGK3 116 aa11.25□□□□□ -0.61
UBXN11-216ENST00000496466 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
UBXN11-216ENST00000496466 MYOZ3Q8TDC0 251 aa11.25□□□□□ -0.61
UBXN11-216ENST00000496466 DAZ1Q9NQZ3 744 aaKnown RBP11.25□□□□□ -0.61
UBXN11-216ENST00000496466 EDN2P20800 178 aa11.25□□□□□ -0.61
UBXN11-216ENST00000496466 J3QLI3 93 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 DPM2O94777 84 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 C10orf99Q6UWK7 81 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 TRBV7-9A0A0J9YWB2 115 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 GNRH2O43555 120 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 SRD5A1P18405 259 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 RASL10AQ92737 203 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 DPH3P1Q9H4G8 78 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 PHLDA3Q9Y5J5 127 aa11.24□□□□□ -0.61
UBXN11-216ENST00000496466 A6NDN8 102 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 C14orf178Q8N769 122 aaPredicted RBP11.23□□□□□ -0.61
UBXN11-216ENST00000496466 ABCA12Q86UK0 2595 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 H3BRM9 83 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 K7EMT4 169 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
UBXN11-216ENST00000496466 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
UBXN11-216ENST00000496466 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
UBXN11-216ENST00000496466 TTTY13Q9BZ97 58 aa11.22□□□□□ -0.61
UBXN11-216ENST00000496466 TMEM160Q9NX00 188 aa11.22□□□□□ -0.61
UBXN11-216ENST00000496466 TMEM238LA0A1B0GVL6 79 aa11.21□□□□□ -0.61
UBXN11-216ENST00000496466 C9orf118A6NHY6 69 aa11.21□□□□□ -0.61
UBXN11-216ENST00000496466 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
UBXN11-216ENST00000496466 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.61
UBXN11-216ENST00000496466 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.61
UBXN11-216ENST00000496466 ZNF580Q9UK33 172 aa11.21□□□□□ -0.61
UBXN11-216ENST00000496466 A0A087WX48 190 aa11.21□□□□□ -0.62
UBXN11-216ENST00000496466 K7EP34 96 aa11.21□□□□□ -0.62
UBXN11-216ENST00000496466 PSMB8P28062 276 aa11.21□□□□□ -0.62
UBXN11-216ENST00000496466 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.62
UBXN11-216ENST00000496466 Q5PR19 223 aa11.21□□□□□ -0.62
UBXN11-216ENST00000496466 C20orf78Q9BR46 151 aa11.21□□□□□ -0.62
UBXN11-216ENST00000496466 NAV2Q8IVL1 2488 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 FSHBP01225 129 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 MGPP08493 103 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 SCGB1A1P11684 91 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 ID1P41134 155 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 HIGD1BQ9P298 99 aa11.2□□□□□ -0.62
UBXN11-216ENST00000496466 KLLNB2CW77 178 aa11.19□□□□□ -0.62
UBXN11-216ENST00000496466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.19□□□□□ -0.62
UBXN11-216ENST00000496466 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
UBXN11-216ENST00000496466 CR1P17927 2039 aa11.19□□□□□ -0.62
UBXN11-216ENST00000496466 TOMM6Q96B49 74 aa11.19□□□□□ -0.62
UBXN11-216ENST00000496466 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
UBXN11-216ENST00000496466 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 NXPH4O95158 308 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 Q6YL49 198 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 POM121L12Q8N7R1 296 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
UBXN11-216ENST00000496466 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 Q96MF0 132 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 CHAC1Q9BUX1 264 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 MUC4Q99102 2169 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 TRBV25-1A0A075B6N4 114 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 H3BUT2 72 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 K7EMI3 77 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 PLNP26678 52 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
UBXN11-216ENST00000496466 H7C1H1 209 aa11.16□□□□□ -0.62
UBXN11-216ENST00000496466 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
UBXN11-216ENST00000496466 LINC00315P59091 139 aa11.16□□□□□ -0.62
UBXN11-216ENST00000496466 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
UBXN11-216ENST00000496466 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
UBXN11-216ENST00000496466 NAA38Q9BRA0 125 aaKnown RBP11.16□□□□□ -0.62
UBXN11-216ENST00000496466 F8VRH5 84 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 GCSHP23434 173 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 DOPEY2Q9Y3R5 2298 aa11.15□□□□□ -0.62
UBXN11-216ENST00000496466 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms