RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
PTPRE-211ENST00000495530 X6R8D5 127 aa10.57□□□□□ -0.72
PTPRE-211ENST00000495530 DNAH7Q8WXX0 4024 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 SNURFLB1AK76 121 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
PTPRE-211ENST00000495530 SMIM27A0A1W2PRY6 76 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 OR5AL1P0C617 328 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 GZMBP10144 247 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 AZU1P20160 251 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 S100PP25815 95 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 ZNF575Q86XF7 245 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 MUC7Q8TAX7 377 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 RNASE8Q8TDE3 154 aaKnown RBP10.55□□□□□ -0.72
PTPRE-211ENST00000495530 BORCS7Q96B45 105 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 SSBP4Q9BWG4 385 aaPredicted RBP10.55□□□□□ -0.72
PTPRE-211ENST00000495530 RYR1P21817 5038 aa10.55□□□□□ -0.72
PTPRE-211ENST00000495530 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 PRM2P04554 102 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 IGLC6P0CF74 106 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
PTPRE-211ENST00000495530 TCL1AP56279 114 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 WDR73Q6P4I2 378 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
PTPRE-211ENST00000495530 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-211ENST00000495530 H3BVH4 76 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 SNAI2O43623 268 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 CACNG7P62955 275 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
PTPRE-211ENST00000495530 LYZL1Q6UWQ5 148 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 C11orf72Q8NBR9 251 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 HERC2O95714 4834 aa10.53□□□□□ -0.72
PTPRE-211ENST00000495530 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 M0R2P5 195 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 ATRAIDQ6UW56 229 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 NUP35Q8NFH5 326 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 PTH2Q96A98 100 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 BTF3L4Q96K17 158 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.73
PTPRE-211ENST00000495530 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 A0A1B0GUT8 65 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 CTRLP40313 264 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 LGALS9BQ3B8N2 356 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 Q8NAQ8 132 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 NDUFAF3Q9BU61 184 aa10.51□□□□□ -0.73
PTPRE-211ENST00000495530 TEX48A0A1B0GUV7 120 aa10.5□□□□□ -0.73
PTPRE-211ENST00000495530 EMP1P54849 157 aa10.5□□□□□ -0.73
PTPRE-211ENST00000495530 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-211ENST00000495530 RIGQ13278 110 aa10.5□□□□□ -0.73
PTPRE-211ENST00000495530 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
PTPRE-211ENST00000495530 RETNQ9HD89 108 aa10.5□□□□□ -0.73
PTPRE-211ENST00000495530 NOP10Q9NPE3 64 aaKnown RBP10.5□□□□□ -0.73
PTPRE-211ENST00000495530 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 A0A1B0GW15 77 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 PLAC8L1A1L4L8 177 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 S100A8P05109 93 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 NTF3P20783 257 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 RASL10AQ92737 203 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
PTPRE-211ENST00000495530 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
PTPRE-211ENST00000495530 SPINK4O60575 86 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 TWIST1Q15672 202 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 IL17DQ8TAD2 202 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 URGCP-MRPS24S4R325 110 aa10.48□□□□□ -0.73
PTPRE-211ENST00000495530 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
PTPRE-211ENST00000495530 M0R381 172 aa10.47□□□□□ -0.73
PTPRE-211ENST00000495530 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
PTPRE-211ENST00000495530 SSTP61278 116 aa10.47□□□□□ -0.73
PTPRE-211ENST00000495530 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 A8MWV9 139 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 DEFB4AO15263 64 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 NXPH4O95158 308 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 RASL11AQ6T310 242 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
PTPRE-211ENST00000495530 CIDEAO60543 219 aa10.45□□□□□ -0.74
PTPRE-211ENST00000495530 ELOBQ15370 118 aa10.45□□□□□ -0.74
PTPRE-211ENST00000495530 COX19Q49B96 90 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms