RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 CASZ1Q86V15 1759 aa3.86□□□□□ -1.79
SNX13-210ENST00000494402 PKD1L2Q7Z442 2459 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 ABCA3Q99758 1704 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 IGKCP01834 107 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 S100A13Q99584 98 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 KIAA2026Q5HYC2 2103 aa3.85□□□□□ -1.79
SNX13-210ENST00000494402 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 TRBV10-3A0A0K0K1G6 114 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 IGKV2D-28P01615 120 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 IGHV3-33P01772 117 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 MOBPQ13875 183 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 IGFBP7Q16270 282 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 FAM74A1Q5RGS3 127 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 MYOZ3Q8TDC0 251 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 KRTAP1-5Q9BYS1 174 aa3.84□□□□□ -1.79
SNX13-210ENST00000494402 DIDO1Q9BTC0 2240 aaKnown RBP3.84□□□□□ -1.79
SNX13-210ENST00000494402 MAGI2Q86UL8 1455 aa3.84□□□□□ -1.8
SNX13-210ENST00000494402 SMIM31A0A1B0GVY4 71 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 ATOX1O00244 68 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 CYB5AP00167 134 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 PRB4P10163 310 aaPredicted RBP3.83□□□□□ -1.8
SNX13-210ENST00000494402 CNBPP62633 177 aaKnown RBP3.83□□□□□ -1.8
SNX13-210ENST00000494402 SPTSSBQ8NFR3 76 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 TSLPQ969D9 159 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 LRP5O75197 1615 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 CUL9Q8IWT3 2517 aa3.83□□□□□ -1.8
SNX13-210ENST00000494402 COL11A1P12107 1806 aaPredicted RBP3.82□□□□□ -1.8
SNX13-210ENST00000494402 KIAA1549LQ6ZVL6 1849 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 TRBV7-7A0A0K0K1E9 115 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 TMEM30CPA0ZSE6 113 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 NAP1L6A6NFF2 107 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 GNG11P61952 73 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 MGST2Q99735 147 aa3.82□□□□□ -1.8
SNX13-210ENST00000494402 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 MARF1Q9Y4F3 1742 aaKnown RBP3.81□□□□□ -1.8
SNX13-210ENST00000494402 TRAV13-2A0A0B4J235 113 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 CXorf51AA0A1B0GTR3 108 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 NMBP08949 121 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
SNX13-210ENST00000494402 CCL8P80075 99 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 TNRC6AQ8NDV7 1962 aaKnown RBP3.81□□□□□ -1.8
SNX13-210ENST00000494402 DOCK1Q14185 1865 aa3.81□□□□□ -1.8
SNX13-210ENST00000494402 CACNA1DQ01668 2161 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 TRPM7Q96QT4 1865 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 ZNF720Q7Z2F6 126 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 FREM3P0C091 2139 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 EML5Q05BV3 1969 aa3.8□□□□□ -1.8
SNX13-210ENST00000494402 PTPRMP28827 1452 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 PLXNA2O75051 1894 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 LAMB2P55268 1798 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 COL1A2P08123 1366 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 TOPAZ1Q8N9V7 1692 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 IGLV6-57P01721 117 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 FAUP35544 74 aaKnown RBP3.79□□□□□ -1.8
SNX13-210ENST00000494402 SEC11AP67812 179 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 LYPD5Q6UWN5 251 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 S100A16Q96FQ6 103 aaKnown RBP3.79□□□□□ -1.8
SNX13-210ENST00000494402 LINC00052Q96N35 136 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 LINC00474Q9P2X8 69 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 RABAC1Q9UI14 185 aa3.79□□□□□ -1.8
SNX13-210ENST00000494402 PRDM15P57071 1507 aaPredicted RBP3.79□□□□□ -1.8
SNX13-210ENST00000494402 DNMBPQ6XZF7 1577 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 SFT2D2O95562 160 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 TDRG1Q3Y452 100 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 LINC00167Q96N53 147 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 UQCR10Q9UDW1 63 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 HEATR5BQ9P2D3 2071 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 ERVK-7P63135 1459 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 GOLGA3Q08378 1498 aa3.78□□□□□ -1.8
SNX13-210ENST00000494402 LAMC3Q9Y6N6 1575 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 LAMB4A4D0S4 1761 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 LRCOL1A6NCL2 159 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 NUPR1O60356 82 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 RNASE2P10153 161 aaKnown RBP3.77□□□□□ -1.81
SNX13-210ENST00000494402 MPV17LQ2QL34 196 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 C20orf78Q9BR46 151 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 SDK2Q58EX2 2172 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 COL2A1P02458 1487 aaPredicted RBP3.77□□□□□ -1.81
SNX13-210ENST00000494402 SBF2Q86WG5 1849 aa3.77□□□□□ -1.81
SNX13-210ENST00000494402 SEC16AO15027 2179 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 CCDC141Q6ZP82 1450 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 TRBV10-1A0A0K0K1A3 114 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 CCL16O15467 120 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 NDUFC1O43677 76 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 FAM213BQ8TBF2 198 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 CYTL1Q9NRR1 136 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 PLIN4Q96Q06 1357 aa3.76□□□□□ -1.81
SNX13-210ENST00000494402 ATRXP46100 2492 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms