RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 FBN2P35556 2912 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 MSMBP08118 114 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 LGALS1P09382 135 aaKnown RBP12.69□□□□□ -0.38
SYP-208ENST00000494396 INSL3P51460 131 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 PAPPA-AS1Q5QFB9 102 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 TMEM78Q5T7P6 136 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 TEN1Q86WV5 123 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 CELSR2Q9HCU4 2923 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 CTSGP08311 255 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 POLQO75417 2590 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 M0QXV9 152 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 PPP1R17O96001 155 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 Q6ZUT4 128 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 SCGB3A1Q96QR1 104 aa12.68□□□□□ -0.38
SYP-208ENST00000494396 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 B4DSR2 109 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 TSPAN13O95857 204 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 ERCC8Q13216 396 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 SBSPONQ8IVN8 264 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
SYP-208ENST00000494396 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 PLA2G2AP14555 144 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 NDPQ00604 133 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 J3QKU1 62 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 M0R381 172 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 TRGV3P03979 118 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 SMCPP49901 116 aaPredicted RBP12.66□□□□□ -0.38
SYP-208ENST00000494396 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
SYP-208ENST00000494396 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
SYP-208ENST00000494396 BEX4Q9NWD9 120 aaPredicted RBP12.65□□□□□ -0.38
SYP-208ENST00000494396 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
SYP-208ENST00000494396 NAV2Q8IVL1 2488 aa12.65□□□□□ -0.39
SYP-208ENST00000494396 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.39
SYP-208ENST00000494396 PRADC1Q9BSG0 188 aa12.65□□□□□ -0.39
SYP-208ENST00000494396 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.39
SYP-208ENST00000494396 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
SYP-208ENST00000494396 BUB3O43684 328 aa12.64□□□□□ -0.39
SYP-208ENST00000494396 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
SYP-208ENST00000494396 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYP-208ENST00000494396 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
SYP-208ENST00000494396 Q8N9W7 124 aa12.64□□□□□ -0.39
SYP-208ENST00000494396 CD7P09564 240 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 GATA3P23771 443 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 HERVK_113P61574 105 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 NFE4Q86UQ8 179 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 IGHV7-81A0A0B4J1V7 117 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
SYP-208ENST00000494396 S4R3C0 116 aa12.63□□□□□ -0.39
SYP-208ENST00000494396 A8MWV9 139 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 PSMB2P49721 201 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 DEFB113Q30KQ7 82 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 Q5PR19 223 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 CSMD1Q96PZ7 3565 aa12.62□□□□□ -0.39
SYP-208ENST00000494396 A0A096LNT2 108 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 LOC107984156A0A0G2JMH3 177 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 MED14OSP0DP75 135 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 BRD3OSQ6XYD6 125 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 ARL17AQ8IVW1 177 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 LRRC75A-AS1Q8N1F1 130 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 LINC01356Q8N9X3 169 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 PRAC2D3DTV9 90 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
SYP-208ENST00000494396 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 NDUFA11Q86Y39 141 aa12.61□□□□□ -0.39
SYP-208ENST00000494396 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 MT-ATP8P03928 68 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 ASIPP42127 132 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 XGP55808 180 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 SPANXA1Q9NS26 97 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 CLEC3BP05452 202 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
SYP-208ENST00000494396 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
SYP-208ENST00000494396 ZFAND6Q6FIF0 208 aa12.59□□□□□ -0.39
SYP-208ENST00000494396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.39
SYP-208ENST00000494396 PRSS29PA6NIE9 313 aa12.58□□□□□ -0.39
SYP-208ENST00000494396 FAM110DQ8TAY7 271 aaPredicted RBP12.58□□□□□ -0.39
SYP-208ENST00000494396 CSMD2Q7Z408 3487 aa12.58□□□□□ -0.4
SYP-208ENST00000494396 DOPEY2Q9Y3R5 2298 aa12.58□□□□□ -0.4
SYP-208ENST00000494396 APCP25054 2843 aa12.58□□□□□ -0.4
SYP-208ENST00000494396 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms