RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 OR10AG1Q8NH19 301 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 APOC4P55056 127 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 CACNG7P62955 275 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 RIGQ13278 110 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 ZNF493Q6ZR52 646 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 LINC01587Q99440 93 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
VPS52-220ENST00000493674 CBY3A6NI87 242 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 UBE2CO00762 179 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 MT-ND6P03923 174 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
VPS52-220ENST00000493674 PTH2Q96A98 100 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 BORCS7Q96B45 105 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
VPS52-220ENST00000493674 HLA-DQA1P01909 254 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 PRM2P04554 102 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 S100A8P05109 93 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 NTF3P20783 257 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
VPS52-220ENST00000493674 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
VPS52-220ENST00000493674 DEFA6Q01524 100 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 ZNF415Q09FC8 603 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
VPS52-220ENST00000493674 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
VPS52-220ENST00000493674 MUC21A0A0G2JKD1 596 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 MUC21A0A140T8X8 626 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 PLAC8L1A1L4L8 177 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 SNURFLB1AK76 121 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 SPRY2O43597 315 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 AZU1P20160 251 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 CAMPP49913 170 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 TMEM208Q9BTX3 173 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 TMEM191AQ9H0A3 160 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 PHLDA3Q9Y5J5 127 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 X6R8D5 127 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
VPS52-220ENST00000493674 TRGC2P03986 189 aa9.12□□□□□ -0.95
VPS52-220ENST00000493674 SLAQ13239 276 aa9.12□□□□□ -0.95
VPS52-220ENST00000493674 Q6ZWC4 215 aa9.12□□□□□ -0.95
VPS52-220ENST00000493674 SPXQ9BT56 116 aa9.12□□□□□ -0.95
VPS52-220ENST00000493674 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 SMIM9A6NGZ8 99 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 K7EIL1 84 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 TWIST1Q15672 202 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 RNF183Q96D59 192 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 C16orf74Q96GX8 76 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 NDUFAF3Q9BU61 184 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 MRPL18Q9H0U6 180 aaKnown RBP9.11□□□□□ -0.95
VPS52-220ENST00000493674 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 TRAPPC1Q9Y5R8 145 aa9.11□□□□□ -0.95
VPS52-220ENST00000493674 M0R2P5 195 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 M0R381 172 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
VPS52-220ENST00000493674 DEFB135Q30KP9 77 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 FAM104BQ5XKR9 115 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 POM121L12Q8N7R1 296 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 FRZBQ92765 325 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 TP53TG1Q9Y2A0 90 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 TIMM8BQ9Y5J9 83 aaPredicted RBP9.1□□□□□ -0.95
VPS52-220ENST00000493674 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
VPS52-220ENST00000493674 TRGC1P0CF51 173 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 HTN1P15515 57 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 SYT8Q8NBV8 401 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 AP1S3Q96PC3 154 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 RCHY1Q96PM5 261 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 TGP01266 2768 aa9.09□□□□□ -0.95
VPS52-220ENST00000493674 C1orf196B1AJZ1 125 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 APCSP02743 223 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 EVI2AP22794 236 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 LINC00315P59091 139 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 RAB4BP61018 213 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 RASL10AQ92737 203 aa9.08□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 SSTP61278 116 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
VPS52-220ENST00000493674 AMN1Q8IY45 258 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 Q8NAQ8 132 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms