RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 FBN2P35556 2912 aa10.59□□□□□ -0.71
TFE3-204ENST00000493583 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
TFE3-204ENST00000493583 HTN1P15515 57 aa10.59□□□□□ -0.71
TFE3-204ENST00000493583 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
TFE3-204ENST00000493583 SCGB3A1Q96QR1 104 aa10.59□□□□□ -0.71
TFE3-204ENST00000493583 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
TFE3-204ENST00000493583 ACANP16112 2415 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 SIVA1O15304 175 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 TMEM78Q5T7P6 136 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 TEX29Q8N6K0 151 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 GAGE5Q13069 117 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 GAGE6Q13070 117 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 Q6ZUT4 128 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 KIR2DL4Q99706 377 aa10.58□□□□□ -0.72
TFE3-204ENST00000493583 MTORP42345 2549 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 A0A087WWL8 130 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 SLC25A16P16260 332 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 EDN2P20800 178 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 GNLYP22749 145 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 MAPK1IP1LQ8NDC0 245 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 KAAG1Q9UBP8 84 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 IGHV7-81A0A0B4J1V7 117 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 FOXI1Q12951 378 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 LAGE3Q14657 143 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 LY6EQ16553 131 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 PHLDA1Q8WV24 401 aaPredicted RBP10.57□□□□□ -0.72
TFE3-204ENST00000493583 TIMD4Q96H15 378 aa10.57□□□□□ -0.72
TFE3-204ENST00000493583 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
TFE3-204ENST00000493583 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
TFE3-204ENST00000493583 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
TFE3-204ENST00000493583 OR11H12B2RN74 326 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 F5H697 171 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 C19orf84I3L1E1 186 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
TFE3-204ENST00000493583 OR11H1Q8NG94 326 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 OR11H2Q8NH07 326 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 BEX4Q9NWD9 120 aaPredicted RBP10.56□□□□□ -0.72
TFE3-204ENST00000493583 LY6LH3BQJ8 138 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 ZFAND6Q6FIF0 208 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
TFE3-204ENST00000493583 ZNF815PA8K554 130 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 RAX2Q96IS3 184 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 SCGB1C2P0DMR2 95 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 KLRB1Q12918 225 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
TFE3-204ENST00000493583 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 MSRB2Q9Y3D2 182 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 DPF1Q92782 380 aa10.55□□□□□ -0.72
TFE3-204ENST00000493583 ADARB2-AS1A8MUL3 147 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 E9PLD3 99 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 BUB3O43684 328 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 C20orf173Q96LM9 149 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 CITED1Q99966 193 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 PRADC1Q9BSG0 188 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
TFE3-204ENST00000493583 FHL3Q13643 280 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 BPESC1Q9GZL8 116 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
TFE3-204ENST00000493583 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
TFE3-204ENST00000493583 NPC2P61916 151 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 Q8N8P6 123 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 NRACQ8N912 160 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
TFE3-204ENST00000493583 PHLDA3Q9Y5J5 127 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 PRB1P04280 392 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 PDE6HQ13956 83 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
TFE3-204ENST00000493583 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.72
TFE3-204ENST00000493583 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.72
TFE3-204ENST00000493583 CCDC140Q96MF4 163 aa10.52□□□□□ -0.72
TFE3-204ENST00000493583 MUC4Q99102 2169 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 NF1P21359 2839 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 Q6ZS46 218 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 TSPAN13O95857 204 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 RRN3P1Q2M238 152 aa10.52□□□□□ -0.73
TFE3-204ENST00000493583 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
TFE3-204ENST00000493583 ID1P41134 155 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
TFE3-204ENST00000493583 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
TFE3-204ENST00000493583 C2orf66Q6UXQ4 117 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 C8orf31Q8N9H6 132 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 IGLV2-18A0A075B6J9 118 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 A0A087WX48 190 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 PRM2P04554 102 aa10.51□□□□□ -0.73
TFE3-204ENST00000493583 SRSF1Q07955 248 aaKnown RBP eCLIP10.51□□□□□ -0.73
TFE3-204ENST00000493583 TM2D2Q9BX73 214 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms