RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 JPT2Q9H910 190 aa9.07□□□□□ -0.96
UFD1-209ENST00000489406 A8MWV9 139 aa9.06□□□□□ -0.96
UFD1-209ENST00000489406 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
UFD1-209ENST00000489406 NEDD8Q15843 81 aa9.06□□□□□ -0.96
UFD1-209ENST00000489406 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
UFD1-209ENST00000489406 DYNC2LI1Q8TCX1 351 aa9.06□□□□□ -0.96
UFD1-209ENST00000489406 PHYHIPLQ96FC7 376 aa9.06□□□□□ -0.96
UFD1-209ENST00000489406 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 SSBP1Q04837 148 aaKnown RBP9.05□□□□□ -0.96
UFD1-209ENST00000489406 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 SLC25A2Q9BXI2 301 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 C11orf21Q9P2W6 132 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 SCP2D1Q9UJQ7 156 aa9.05□□□□□ -0.96
UFD1-209ENST00000489406 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
UFD1-209ENST00000489406 TSPAN13O95857 204 aa9.04□□□□□ -0.96
UFD1-209ENST00000489406 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
UFD1-209ENST00000489406 RAB5CP51148 216 aa9.03□□□□□ -0.96
UFD1-209ENST00000489406 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
UFD1-209ENST00000489406 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
UFD1-209ENST00000489406 C15orf40Q8WUR7 153 aa9.03□□□□□ -0.96
UFD1-209ENST00000489406 TVP23CQ96ET8 276 aa9.03□□□□□ -0.96
UFD1-209ENST00000489406 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
UFD1-209ENST00000489406 TSC22D2O75157 780 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 PTTG1O95997 202 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 UBE2D3P61077 147 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 UBE2D2P62837 147 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 GCSAMLQ5JQS6 135 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 TMED6Q8WW62 240 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 TRIM63Q969Q1 353 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 FAM167A-AS1Q96KT0 104 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 TREM1Q9NP99 234 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 MCUBQ9NWR8 336 aa9.02□□□□□ -0.97
UFD1-209ENST00000489406 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
UFD1-209ENST00000489406 RPL29P47914 159 aaKnown RBP9.01□□□□□ -0.97
UFD1-209ENST00000489406 RBX1P62877 108 aa9.01□□□□□ -0.97
UFD1-209ENST00000489406 DIRC1Q969H9 104 aa9.01□□□□□ -0.97
UFD1-209ENST00000489406 FXYD5Q96DB9 178 aa9.01□□□□□ -0.97
UFD1-209ENST00000489406 BCL7BQ9BQE9 202 aa9.01□□□□□ -0.97
UFD1-209ENST00000489406 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
UFD1-209ENST00000489406 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
UFD1-209ENST00000489406 MT-ND6P03923 174 aa9□□□□□ -0.97
UFD1-209ENST00000489406 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
UFD1-209ENST00000489406 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
UFD1-209ENST00000489406 REG3AQ06141 175 aa9□□□□□ -0.97
UFD1-209ENST00000489406 C1orf137Q5JT78 98 aa9□□□□□ -0.97
UFD1-209ENST00000489406 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
UFD1-209ENST00000489406 MZT2AQ6P582 158 aa9□□□□□ -0.97
UFD1-209ENST00000489406 MIR17HGQ75NE6 70 aa9□□□□□ -0.97
UFD1-209ENST00000489406 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
UFD1-209ENST00000489406 HYLS1Q96M11 299 aa9□□□□□ -0.97
UFD1-209ENST00000489406 LINC00474Q9P2X8 69 aa9□□□□□ -0.97
UFD1-209ENST00000489406 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
UFD1-209ENST00000489406 PKIAP61925 76 aa8.99□□□□□ -0.97
UFD1-209ENST00000489406 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
UFD1-209ENST00000489406 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
UFD1-209ENST00000489406 WDR83OSQ9Y284 106 aa8.99□□□□□ -0.97
UFD1-209ENST00000489406 TRBV7-3A0A075B6L6 115 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 ZNF80P51504 273 aaPredicted RBP8.98□□□□□ -0.97
UFD1-209ENST00000489406 UBE2D1P51668 147 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 S100A10P60903 97 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 MRPS10P82664 201 aaKnown RBP8.98□□□□□ -0.97
UFD1-209ENST00000489406 GAGE6Q13070 117 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 SMIM4Q8WVI0 70 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 DIRAS2Q96HU8 199 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 NMES1Q9C002 83 aa8.98□□□□□ -0.97
UFD1-209ENST00000489406 RHODO00212 210 aa8.97□□□□□ -0.97
UFD1-209ENST00000489406 SFT2D2O95562 160 aa8.97□□□□□ -0.97
UFD1-209ENST00000489406 NCS1P62166 190 aa8.97□□□□□ -0.97
UFD1-209ENST00000489406 PPP1R1AQ13522 171 aa8.97□□□□□ -0.97
UFD1-209ENST00000489406 TRAV8-4A0A0B4J246 113 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 ANKRD20A5PA0PJZ0 165 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 H0Y9J4 135 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 P01737 135 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 TAS2R30P59541 319 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 BAXQ07812 192 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 SLIRPQ9GZT3 109 aaKnown RBP8.96□□□□□ -0.98
UFD1-209ENST00000489406 UQCC1Q9NVA1 299 aa8.96□□□□□ -0.98
UFD1-209ENST00000489406 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
UFD1-209ENST00000489406 GZMBP10144 247 aa8.95□□□□□ -0.98
UFD1-209ENST00000489406 GOLT1AQ6ZVE7 132 aa8.95□□□□□ -0.98
UFD1-209ENST00000489406 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
UFD1-209ENST00000489406 UBE2L5PA0A1B0GUS4 154 aa8.94□□□□□ -0.98
UFD1-209ENST00000489406 C7orf66A4D0T2 115 aa8.94□□□□□ -0.98
UFD1-209ENST00000489406 S100A4P26447 101 aaKnown RBP8.94□□□□□ -0.98
UFD1-209ENST00000489406 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
UFD1-209ENST00000489406 VBP1P61758 197 aa8.94□□□□□ -0.98
UFD1-209ENST00000489406 CST7O76096 145 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 MBPP02686 304 aaPredicted RBP8.93□□□□□ -0.98
UFD1-209ENST00000489406 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 CFAP161Q6P656 301 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 NTM-AS1Q6ZSK4 140 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 SGK494Q96LW2 274 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 RAB26Q9ULW5 256 aa8.93□□□□□ -0.98
UFD1-209ENST00000489406 OR7C2O60412 319 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms