RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 FAIMQ9NVQ4 179 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 TMEM242Q9NWH2 141 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 CR1P17927 2039 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 ARHGAP5Q13017 1502 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 MYOFQ9NZM1 2061 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 TNRC6AQ8NDV7 1962 aaKnown RBP1.76□□□□□ -2.13
PRPF4-203ENST00000488937 PARP14Q460N5 1801 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 SBF2Q86WG5 1849 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 IL5P05113 134 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 NPC2P61916 151 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 ELOBQ15370 118 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 IGFL1Q6UW32 110 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 SBSPONQ8IVN8 264 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 DSCR8Q96T75 97 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 NDUFA12Q9UI09 145 aa1.76□□□□□ -2.13
PRPF4-203ENST00000488937 SNRNP200O75643 2136 aaKnown RBP1.76□□□□□ -2.13
PRPF4-203ENST00000488937 CASKIN1Q8WXD9 1431 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 ZGRF1Q86YA3 2104 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 CHD1O14646 1710 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 TOPAZ1Q8N9V7 1692 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 CXorf51AA0A1B0GTR3 108 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 SPANXN1Q5VSR9 72 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 TSKUQ8WUA8 353 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 TMEM141Q96I45 108 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 DPH3P1Q9H4G8 78 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 LINC00312Q9Y6C7 94 aa1.75□□□□□ -2.13
PRPF4-203ENST00000488937 NSD3Q9BZ95 1437 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 ZNF142P52746 1687 aaPredicted RBP1.74□□□□□ -2.13
PRPF4-203ENST00000488937 TCHHQ07283 1943 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 ERCC6L2Q5T890 1561 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 BAZ1AQ9NRL2 1556 aaPredicted RBP1.74□□□□□ -2.13
PRPF4-203ENST00000488937 LYPD1Q8N2G4 141 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 PPDPFLQ8WWR9 84 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 PATE1Q8WXA2 126 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 TVP23CQ96ET8 276 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 DPY30Q9C005 99 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 V9GYS6 101 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 MYO18AQ92614 2054 aaKnown RBP1.74□□□□□ -2.13
PRPF4-203ENST00000488937 STRCP1A6NGW2 1772 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 DAPK1P53355 1430 aa1.74□□□□□ -2.13
PRPF4-203ENST00000488937 FN1P02751 2386 aaKnown RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 TANC1Q9C0D5 1861 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 RTTNQ86VV8 2226 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 IGKV1D-17A0A075B6S4 117 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 FAM24AA6NFZ4 105 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 H3BQ15 152 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 PIPP12273 146 aaPredicted RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 INSL4Q14641 139 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 RHOHQ15669 191 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 IQCJQ1A5X6 159 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 C5orf38Q86SI9 138 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 LINC00052Q96N35 136 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 CYTL1Q9NRR1 136 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 SCP2D1Q9UJQ7 156 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 TNS1Q9HBL0 1735 aaKnown RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 BAZ2BQ9UIF8 2168 aaKnown RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 GAPVD1Q14C86 1478 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 MAGI1Q96QZ7 1491 aaPredicted RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 ARHGAP35Q9NRY4 1499 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 TET3O43151 1660 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 COL4A4P53420 1690 aaPredicted RBP1.73□□□□□ -2.13
PRPF4-203ENST00000488937 C10orf71Q711Q0 1435 aa1.73□□□□□ -2.13
PRPF4-203ENST00000488937 THOC2Q8NI27 1593 aaKnown RBP1.72□□□□□ -2.13
PRPF4-203ENST00000488937 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 NWD2Q9ULI1 1742 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 FYCO1Q9BQS8 1478 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 SDHAF1A6NFY7 115 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 CCL16O15467 120 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 SNCGO76070 127 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 SLC25A6P12236 298 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
PRPF4-203ENST00000488937 COX7CP15954 63 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 DCDP81605 110 aaKnown RBP1.72□□□□□ -2.13
PRPF4-203ENST00000488937 SPRNQ5BIV9 151 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 C4orf33Q8N1A6 199 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 ZNF431Q8TF32 576 aaPredicted RBP1.72□□□□□ -2.13
PRPF4-203ENST00000488937 LINC00167Q96N53 147 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 UNC13CQ8NB66 2214 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 DOCK2Q92608 1830 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 CPSF1Q10570 1443 aaKnown RBP1.72□□□□□ -2.13
PRPF4-203ENST00000488937 ARFGEF3Q5TH69 2177 aa1.72□□□□□ -2.13
PRPF4-203ENST00000488937 COL5A3P25940 1745 aaPredicted RBP1.71□□□□□ -2.13
PRPF4-203ENST00000488937 DCAF1Q9Y4B6 1507 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 PLXNA1Q9UIW2 1896 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 CTTNBP2Q8WZ74 1663 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 ALPK2Q86TB3 2170 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 IFT140Q96RY7 1462 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 EXPH5Q8NEV8 1989 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 IGKV2-24A0A0C4DH68 120 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 A0A0J9YY99 117 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 UBE2L5PA0A1B0GUS4 154 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 RBAKDNA6NC62 111 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 SSSCA1O60232 199 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 MT-ATP8P03928 68 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 CBLN1P23435 193 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms