RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 LAGE3Q14657 143 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 LELP1Q5T871 98 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 CFAP126Q5VTH2 177 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 TM2D2Q9BX73 214 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 WFDC1Q9HC57 220 aa7.57□□□□□ -1.2
VAMP7-206ENST00000488344 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
VAMP7-206ENST00000488344 HMGB3O15347 200 aaKnown RBP7.56□□□□□ -1.2
VAMP7-206ENST00000488344 EIF3GO75821 320 aaKnown RBP eCLIP7.56□□□□□ -1.2
VAMP7-206ENST00000488344 CXorf1O96002 111 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 GCGP01275 180 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 GCHFRP30047 84 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 FLI1Q01543 452 aaPredicted RBP7.56□□□□□ -1.2
VAMP7-206ENST00000488344 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 CYB561D1Q8N8Q1 229 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 TMEM75Q8N9X5 138 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 ATP6V0E2Q8NHE4 81 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 RAB24Q969Q5 203 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
VAMP7-206ENST00000488344 A8MWV9 139 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
VAMP7-206ENST00000488344 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
VAMP7-206ENST00000488344 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 ZFP2Q6ZN57 461 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 SUN5Q8TC36 379 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 AQP10Q96PS8 301 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 ACTR3CQ9C0K3 210 aaPredicted RBP7.55□□□□□ -1.2
VAMP7-206ENST00000488344 EPDR1Q9UM22 224 aa7.55□□□□□ -1.2
VAMP7-206ENST00000488344 A6NHS1 94 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
VAMP7-206ENST00000488344 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 PRNTQ86SH4 94 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 Q9HAA7 133 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 TNFSF18Q9UNG2 199 aa7.54□□□□□ -1.2
VAMP7-206ENST00000488344 A0A087WWC5 75 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 A0A1W2PRE2 83 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 LRCOL1A6NCL2 159 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 C1QBP02746 253 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 SEC11BP0C7V7 166 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 ATP6V0CP27449 155 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 ASIPP42127 132 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
VAMP7-206ENST00000488344 FGF8P55075 233 aaPredicted RBP7.53□□□□□ -1.2
VAMP7-206ENST00000488344 Q8N814 137 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 NKX6-2Q9C056 277 aaPredicted RBP7.53□□□□□ -1.2
VAMP7-206ENST00000488344 MED28Q9H204 178 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
VAMP7-206ENST00000488344 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 PGPEP1LA6NFU8 196 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 FABP5P3A8MUU1 101 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 GGTLC3B5MD39 225 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 RHODO00212 210 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 Q6ZSN1 163 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 SYT8Q8NBV8 401 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 INO80EQ8NBZ0 244 aaPredicted RBP7.52□□□□□ -1.21
VAMP7-206ENST00000488344 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
VAMP7-206ENST00000488344 PTTG1O95997 202 aa7.51□□□□□ -1.21
VAMP7-206ENST00000488344 IFNA7P01567 189 aa7.51□□□□□ -1.21
VAMP7-206ENST00000488344 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
VAMP7-206ENST00000488344 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
VAMP7-206ENST00000488344 LGALSLQ3ZCW2 172 aaPredicted RBP7.51□□□□□ -1.21
VAMP7-206ENST00000488344 RMI2Q96E14 147 aa7.51□□□□□ -1.21
VAMP7-206ENST00000488344 PARLQ9H300 379 aa7.51□□□□□ -1.21
VAMP7-206ENST00000488344 CTXND1A0A1B0GTU2 59 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GHRHP01286 108 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GIPP09681 153 aaPredicted RBP7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GAGE1Q13065 139 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GAGE4Q13068 117 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GAGE5Q13069 117 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
VAMP7-206ENST00000488344 IL36BQ9NZH7 164 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 ARL2-SNX15V9GYD0 113 aa7.5□□□□□ -1.21
VAMP7-206ENST00000488344 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
VAMP7-206ENST00000488344 B4DEV8 164 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 PEX7O00628 323 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 Q86TA4 180 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 TCEAL7Q9BRU2 100 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 BATF3Q9NR55 127 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 ZFP30Q9Y2G7 519 aa7.49□□□□□ -1.21
VAMP7-206ENST00000488344 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms