RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
ATPAF1-205ENST00000487193 PFDN5Q99471 154 aa7.23□□□□□ -1.25
ATPAF1-205ENST00000487193 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
ATPAF1-205ENST00000487193 RABL2BQ9UNT1 228 aa7.23□□□□□ -1.25
ATPAF1-205ENST00000487193 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
ATPAF1-205ENST00000487193 DUXBA0A1W2PPF3 345 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 FAM25AB3EWG3 89 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 FAM25CB3EWG5 89 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 FAM25GB3EWG6 89 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 NBEAP1P0C6P0 100 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 RBX1P62877 108 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 UFSP1Q6NVU6 142 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 PTH2Q96A98 100 aa7.22□□□□□ -1.25
ATPAF1-205ENST00000487193 SSSCA1O60232 199 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 PTTG1O95997 202 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 REG3AQ06141 175 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 ARL16Q0P5N6 197 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 CNBD2Q96M20 576 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.26
ATPAF1-205ENST00000487193 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 RNASE3P12724 160 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 UBE2D3P61077 147 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 LSM3P62310 102 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 RANP62826 216 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 UBE2D2P62837 147 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 RPL36AP83881 106 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 CYCSP99999 105 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 GAGE6Q13070 117 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 C15orf56Q8N910 161 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 RPL36ALQ969Q0 106 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 PHYHIPLQ96FC7 376 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 SMIM8Q96KF7 97 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 SLC25A2Q9BXI2 301 aa7.2□□□□□ -1.26
ATPAF1-205ENST00000487193 PRRT1Q99946 306 aa7.19□□□□□ -1.26
ATPAF1-205ENST00000487193 TREM1Q9NP99 234 aa7.19□□□□□ -1.26
ATPAF1-205ENST00000487193 RABL2AQ9UBK7 228 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-205ENST00000487193 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 PIGBOS1A0A0B4J2F0 54 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 S100A10P60903 97 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 PKIAP61925 76 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 ID3Q02535 119 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 CLVS1Q8IUQ0 354 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 DYNC2LI1Q8TCX1 351 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 TVP23CQ96ET8 276 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 HYLS1Q96M11 299 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 SCGB3A2Q96PL1 93 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 BCL7BQ9BQE9 202 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 MLST8Q9BVC4 326 aa7.18□□□□□ -1.26
ATPAF1-205ENST00000487193 TRAV8-4A0A0B4J246 113 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 P01737 135 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 AKAIN1P0CW23 69 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 NMES1Q9C002 83 aa7.17□□□□□ -1.26
ATPAF1-205ENST00000487193 TSC22D2O75157 780 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 GZMBP10144 247 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 GABARAPL2P60520 117 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 GCSAMLQ5JQS6 135 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 PRR27Q6MZM9 219 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 TMED6Q8WW62 240 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 DIRAS2Q96HU8 199 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 GGACTQ9BVM4 153 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 EXTL2Q9UBQ6 330 aa7.16□□□□□ -1.26
ATPAF1-205ENST00000487193 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 AMTP48728 403 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 RAB2AP61019 212 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 EIF5AP63241 154 aaKnown RBP7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 MIR17HGQ75NE6 70 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 FXYD5Q96DB9 178 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 FAM167A-AS1Q96KT0 104 aa7.15□□□□□ -1.26
ATPAF1-205ENST00000487193 GAGE12HA6NDE8 117 aa7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 RHODO00212 210 aa7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 S100A4P26447 101 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 RPL29P47914 159 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 NTM-AS1Q6ZSK4 140 aa7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 PHF5AQ7RTV0 110 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 SCP2D1Q9UJQ7 156 aa7.14□□□□□ -1.27
ATPAF1-205ENST00000487193 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 TRBV10-1A0A0K0K1A3 114 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 SCGB1D2O95969 90 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 MT1HP80294 61 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 SLIRPQ9GZT3 109 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 MCUBQ9NWR8 336 aa7.13□□□□□ -1.27
ATPAF1-205ENST00000487193 NEDD8Q15843 81 aa7.12□□□□□ -1.27
ATPAF1-205ENST00000487193 PIK3CD-AS1Q5SR53 167 aa7.12□□□□□ -1.27
ATPAF1-205ENST00000487193 GOLT1AQ6ZVE7 132 aa7.12□□□□□ -1.27
ATPAF1-205ENST00000487193 A0A087WZ39 114 aa7.11□□□□□ -1.27
ATPAF1-205ENST00000487193 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms