RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 ATP5LO75964 103 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
HSPG2-211ENST00000486901 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 A0A087WX48 190 aa9.46□□□□□ -0.89
HSPG2-211ENST00000486901 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.89
HSPG2-211ENST00000486901 LY6EQ16553 131 aa9.46□□□□□ -0.89
HSPG2-211ENST00000486901 C20orf173Q96LM9 149 aa9.46□□□□□ -0.89
HSPG2-211ENST00000486901 ZMAT4Q9H898 229 aa9.46□□□□□ -0.89
HSPG2-211ENST00000486901 NDUFS8O00217 210 aa9.46□□□□□ -0.9
HSPG2-211ENST00000486901 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
HSPG2-211ENST00000486901 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.9
HSPG2-211ENST00000486901 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-211ENST00000486901 PHLDA3Q9Y5J5 127 aa9.46□□□□□ -0.9
HSPG2-211ENST00000486901 HOXA3O43365 443 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-211ENST00000486901 RRN3P1Q2M238 152 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 CCDC140Q96MF4 163 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 TM2D2Q9BX73 214 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 EDN2P20800 178 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 KIR2DL4Q99706 377 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 CKS1BP61024 79 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 BRD3OSQ6XYD6 125 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 Q8N9W7 124 aa9.45□□□□□ -0.9
HSPG2-211ENST00000486901 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 CLPSL1A2RUU4 121 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 CIDEAO60543 219 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
HSPG2-211ENST00000486901 BEX4Q9NWD9 120 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-211ENST00000486901 HTN1P15515 57 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 MORN3Q6PF18 240 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-211ENST00000486901 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 PRRC2AP48634 2157 aaKnown RBP9.44□□□□□ -0.9
HSPG2-211ENST00000486901 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 NFE4Q86UQ8 179 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 NPBQ8NG41 125 aa9.44□□□□□ -0.9
HSPG2-211ENST00000486901 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-211ENST00000486901 TRAV26-1A0A087WT03 109 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 F8VRH5 84 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 J3QR89 54 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 Q6ZS46 218 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 RASL10AQ92737 203 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 H7C1H1 209 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 PRTN3P24158 256 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
HSPG2-211ENST00000486901 METTL26Q96S19 204 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 ITPR1Q14643 2758 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 F8W1H4 67 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 SAA4P35542 130 aa9.43□□□□□ -0.9
HSPG2-211ENST00000486901 OR11H6Q8NGC7 330 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-211ENST00000486901 FHL3Q13643 280 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 C1orf122Q6ZSJ8 110 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 DUX5Q96PT3 197 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 ATP6V0BQ99437 205 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 RNF5Q99942 180 aa9.42□□□□□ -0.9
HSPG2-211ENST00000486901 MUC4Q99102 2169 aa9.41□□□□□ -0.9
HSPG2-211ENST00000486901 KHDC1LQ5JSQ8 128 aa9.41□□□□□ -0.9
HSPG2-211ENST00000486901 NPC2P61916 151 aa9.41□□□□□ -0.9
HSPG2-211ENST00000486901 C11orf86A6NJI1 115 aa9.4□□□□□ -0.9
HSPG2-211ENST00000486901 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
HSPG2-211ENST00000486901 GATA3P23771 443 aa9.4□□□□□ -0.9
HSPG2-211ENST00000486901 A0A1W2PPR1 153 aa9.4□□□□□ -0.9
HSPG2-211ENST00000486901 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.9
HSPG2-211ENST00000486901 PLNP26678 52 aa9.4□□□□□ -0.91
HSPG2-211ENST00000486901 NRGNQ92686 78 aa9.4□□□□□ -0.91
HSPG2-211ENST00000486901 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 SMPXQ9UHP9 88 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 TSPAN13O95857 204 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
HSPG2-211ENST00000486901 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 PSMG3-AS1Q96PY0 264 aa9.39□□□□□ -0.91
HSPG2-211ENST00000486901 TSPEAR-AS2P59090 65 aa9.38□□□□□ -0.91
HSPG2-211ENST00000486901 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
HSPG2-211ENST00000486901 A0A1B0GV72 72 aa9.38□□□□□ -0.91
HSPG2-211ENST00000486901 XGP55808 180 aa9.38□□□□□ -0.91
HSPG2-211ENST00000486901 FOXI1Q12951 378 aa9.38□□□□□ -0.91
HSPG2-211ENST00000486901 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
HSPG2-211ENST00000486901 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-211ENST00000486901 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
HSPG2-211ENST00000486901 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
HSPG2-211ENST00000486901 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
HSPG2-211ENST00000486901 CFAP46Q8IYW2 2715 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms