RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MARCH3Q86UD3 253 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 SPANXA2-OT1Q8N9U9 137 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 LINC01560Q8TB33 94 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 UBE2WQ96B02 151 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 ODF3Q96PU9 254 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 UPK3BQ9BT76 320 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 CHCHD7Q9BUK0 85 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 TP73-AS1Q9UF72 201 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 A0A1B0GUL6 1792 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 UNC13BO14795 1591 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 CEP170Q5SW79 1584 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 SPHKAPQ2M3C7 1700 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 LRRIQ1Q96JM4 1722 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 MYO5CQ9NQX4 1742 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 SCN1AP35498 2009 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 DOCK3Q8IZD9 2030 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 KIF1AQ12756 1690 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 QRICH2Q9H0J4 1663 aa1.2□□□□□ -2.22
ITGB1-213ENST00000484088 ITGB4P16144 1822 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 FOCADQ5VW36 1801 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TNRC6AQ8NDV7 1962 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 MRC1P22897 1456 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 MADDQ8WXG6 1647 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 MAP3K4Q9Y6R4 1608 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 LTN1O94822 1766 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 MYH2Q9UKX2 1941 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TRAV7A0A075B6U4 112 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3-49A0A0A0MS15 119 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3-21A0A0B4J1V1 117 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3-43A0A0B4J1X8 118 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TRAV1-2A0A0B4J238 106 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV6-21A0A0C4DH24 114 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV7-4-1A0A0J9YVY3 117 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TRBV10-3A0A0K0K1G6 114 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TRBV10-2A0A0K0K1G8 114 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 hDV103S1A0JD37 113 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 C17orf51A8MQB3 221 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CEBPZOSA8MTT3 80 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 H3BVH4 76 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 HMGN2P05204 90 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3-30-3P0DP02 117 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 IFI27P40305 119 aaPredicted RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TSPEAR-AS2P59090 65 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 SNRPGP62308 76 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CHD3Q12873 2000 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 NWD1Q149M9 1564 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 PLGLAQ15195 96 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 ATXN8Q156A1 80 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 MIAQ16674 131 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 PATE2Q6UY27 113 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 ZNF818PQ6ZRF7 136 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 C2orf91Q6ZV80 131 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 KNDC1Q76NI1 1749 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 LINC00269Q8N2A0 174 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CCL4L1Q8NHW4 92 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 NABP2Q9BQ15 211 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CMC2Q9NRP2 79 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 PRO1854Q9UHT4 67 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 PHLDA3Q9Y5J5 127 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 TIMM9Q9Y5J7 89 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 KIF13BQ9NQT8 1826 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 WIZO95785 1651 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CFAP43Q8NDM7 1665 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 ATP7AQ04656 1500 aa1.19□□□□□ -2.22
ITGB1-213ENST00000484088 BAZ2AQ9UIF9 1905 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 DICER1Q9UPY3 1922 aaKnown RBP1.19□□□□□ -2.22
ITGB1-213ENST00000484088 CLTCL1P53675 1640 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 PTPRMP28827 1452 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 SBF1O95248 1867 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 CDK5RAP2Q96SN8 1893 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 SHANK3Q9BYB0 1731 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ADGRB1O14514 1584 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 GLI2P10070 1586 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 MED1Q15648 1581 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-213ENST00000484088 VWDEQ8N2E2 1590 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 DIP2BQ9P265 1576 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 BRWD3Q6RI45 1802 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 TRBV7-3A0A075B6L6 115 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 TRBV7-1A0A0A6YYK4 115 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 LOC107984156A0A0G2JMH3 177 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 C2orf70A6NJV1 201 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ZNF815PA8K554 130 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 SH2D1AO60880 128 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 CPSF4O95639 269 aaKnown RBP1.18□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV1-16P04430 117 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 XCL1P47992 114 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 DSCR4P56555 118 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-213ENST00000484088 UBE2D3P61077 147 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 UBE2D2P62837 147 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 SERF2P84101 59 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 CASC2Q6XLA1 102 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ZNF826PQ6ZT77 177 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 VMO1Q7Z5L0 202 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 NDUFA11Q86Y39 141 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ARL17AQ8IVW1 177 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 CNEP1R1Q8N9A8 125 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ST20-AS1Q8NBB2 130 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms