RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 OR5AL1P0C617 328 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 ARMS2P0C7Q2 107 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 AZU1P20160 251 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 S100PP25815 95 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 ASIPP42127 132 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 APOC4P55056 127 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 LYZL1Q6UWQ5 148 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 PGLYRP4Q96LB8 373 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 MDFICQ9P1T7 246 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 GOLT1BQ9Y3E0 138 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 X6R8D5 127 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 TRGV11A0A075B6L2 103 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 PLAC8L1A1L4L8 177 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 CBY3A6NI87 242 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 H3BVH4 76 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 UBE2CO00762 179 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 SPRY2O43597 315 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 NXPH4O95158 308 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 GATD1Q8NB37 220 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 OR10AG1Q8NH19 301 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 RNASE8Q8TDE3 154 aaKnown RBP5.95□□□□□ -1.46
USP4-210ENST00000483212 BTF3L4Q96K17 158 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 LINC01587Q99440 93 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
USP4-210ENST00000483212 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
USP4-210ENST00000483212 MUC21A0A0G2JKD1 596 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 MUC21A0A140T8X8 626 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 A0A1B0GUT8 65 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 F2Z2F3 143 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 SPINK4O60575 86 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 DEFB135Q30KP9 77 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 MRPL54Q6P161 138 aaKnown RBP5.94□□□□□ -1.46
USP4-210ENST00000483212 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 Q6ZWC4 215 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 ATP5L2Q7Z4Y8 100 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 RNF183Q96D59 192 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 FAM210BQ96KR6 192 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 TPPP3Q9BW30 176 aa5.94□□□□□ -1.46
USP4-210ENST00000483212 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 RAB5AP20339 215 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 S100A4P26447 101 aaKnown RBP5.93□□□□□ -1.46
USP4-210ENST00000483212 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 TMEM136Q6ZRR5 245 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 TMEM263Q8WUH6 116 aaKnown RBP5.93□□□□□ -1.46
USP4-210ENST00000483212 PTH2Q96A98 100 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 TMEM208Q9BTX3 173 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 MSRB1Q9NZV6 116 aa5.93□□□□□ -1.46
USP4-210ENST00000483212 SMIM9A6NGZ8 99 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 PHOX2AO14813 284 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 HTN1P15515 57 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 NTF3P20783 257 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 CACNG7P62955 275 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 HBBP68871 147 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 RIGQ13278 110 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 ZNF493Q6ZR52 646 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 C16orf74Q96GX8 76 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 OVOL2Q9BRP0 275 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 TP53TG1Q9Y2A0 90 aa5.92□□□□□ -1.46
USP4-210ENST00000483212 TIMM8BQ9Y5J9 83 aaPredicted RBP5.92□□□□□ -1.46
USP4-210ENST00000483212 MUC4Q99102 2169 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 A0A1B0GW15 77 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 CAMPP49913 170 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 DAZ2Q13117 558 aaKnown RBP5.91□□□□□ -1.46
USP4-210ENST00000483212 PIK3CD-AS1Q5SR53 167 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 SPANXN1Q5VSR9 72 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 SBSPONQ8IVN8 264 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 ZFP82Q8N141 532 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 Q8NAQ8 132 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 SPXQ9BT56 116 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 GNB1LQ9BYB4 327 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 RETNQ9HD89 108 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 KIF25-AS1Q9Y6Z4 181 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
USP4-210ENST00000483212 SNURFLB1AK76 121 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 M0R2P5 195 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 M0R381 172 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 LINC00315P59091 139 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 SSTP61278 116 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 TWIST1Q15672 202 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 COX19Q49B96 90 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 LINC00612Q8N6U2 182 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.9□□□□□ -1.46
USP4-210ENST00000483212 OR11H2Q8NH07 326 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 RASL10AQ92737 203 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 BORCS7Q96B45 105 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 RNF185Q96GF1 192 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 TM2D3Q9BRN9 247 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 TMEM191AQ9H0A3 160 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 JPT2Q9H910 190 aa5.9□□□□□ -1.46
USP4-210ENST00000483212 NBEAL2Q6ZNJ1 2754 aa5.9□□□□□ -1.47
USP4-210ENST00000483212 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.47
USP4-210ENST00000483212 IGHV4-28A0A0C4DH34 117 aa5.89□□□□□ -1.47
USP4-210ENST00000483212 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
USP4-210ENST00000483212 MT-ND6P03923 174 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms