RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 IGHV4OR15-8A0A075B7B6 117 aa18.53■□□□□ 0.56
SYNGAP1-206ENST00000479510 A0A087WW49 117 aa18.53■□□□□ 0.56
SYNGAP1-206ENST00000479510 MAPKAPK5-AS1Q8N8E1 139 aa18.53■□□□□ 0.56
SYNGAP1-206ENST00000479510 RPL39LQ96EH5 51 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-206ENST00000479510 MGPP08493 103 aa18.52■□□□□ 0.56
SYNGAP1-206ENST00000479510 C2orf66Q6UXQ4 117 aa18.52■□□□□ 0.56
SYNGAP1-206ENST00000479510 NAA38Q9BRA0 125 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-206ENST00000479510 OR11H12B2RN74 326 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 F6UB75 175 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 GNRH2O43555 120 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 ATP5J2P56134 94 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 NEGR1Q7Z3B1 354 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 OR11H1Q8NG94 326 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 OR11H2Q8NH07 326 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 KIF25-AS1Q9Y6Z4 181 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 NCOR2Q9Y618 2525 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 DEFB1P60022 68 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 ODF3Q96PU9 254 aa18.51■□□□□ 0.55
SYNGAP1-206ENST00000479510 IGHV4-30-2A0A087WSY4 118 aa18.5■□□□□ 0.55
SYNGAP1-206ENST00000479510 GATA3P23771 443 aa18.5■□□□□ 0.55
SYNGAP1-206ENST00000479510 BAALCQ8WXS3 180 aa18.5■□□□□ 0.55
SYNGAP1-206ENST00000479510 TMEM89A2RUT3 159 aa18.49■□□□□ 0.55
SYNGAP1-206ENST00000479510 FAM159AQ6UWV7 190 aa18.49■□□□□ 0.55
SYNGAP1-206ENST00000479510 CSTL1Q9H114 145 aa18.49■□□□□ 0.55
SYNGAP1-206ENST00000479510 NHP2Q9NX24 153 aaKnown RBP18.49■□□□□ 0.55
SYNGAP1-206ENST00000479510 MYMXA0A1B0GTQ4 84 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 B4DSR2 109 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 LINC00315P59091 139 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 DCANP1Q8TF63 244 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 CSMD1Q96PZ7 3565 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 C21orf62-AS1Q17RA5 79 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 Q6ZS46 218 aa18.48■□□□□ 0.55
SYNGAP1-206ENST00000479510 E9PLD3 99 aa18.47■□□□□ 0.55
SYNGAP1-206ENST00000479510 DSCR9P59020 149 aa18.46■□□□□ 0.55
SYNGAP1-206ENST00000479510 CHD8Q9HCK8 2581 aa18.46■□□□□ 0.55
SYNGAP1-206ENST00000479510 SPRY2O43597 315 aa18.46■□□□□ 0.55
SYNGAP1-206ENST00000479510 HIST1H4GQ99525 98 aa18.46■□□□□ 0.55
SYNGAP1-206ENST00000479510 CYSLTR1Q9Y271 337 aa18.46■□□□□ 0.55
SYNGAP1-206ENST00000479510 TRBV7-3A0A075B6L6 115 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 PRSS29PA6NIE9 313 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 PAPPA-AS1Q5QFB9 102 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 IGKV3-7A0A075B6H7 116 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 G3V4G9 280 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 PSMB8P28062 276 aa18.45■□□□□ 0.54
SYNGAP1-206ENST00000479510 A0A1B0GWB2 263 aa18.44■□□□□ 0.54
SYNGAP1-206ENST00000479510 K7ERJ3 54 aa18.44■□□□□ 0.54
SYNGAP1-206ENST00000479510 LCNL1Q6ZST4 164 aa18.44■□□□□ 0.54
SYNGAP1-206ENST00000479510 POLR2KP53803 58 aaKnown RBP18.43■□□□□ 0.54
SYNGAP1-206ENST00000479510 C12orf74Q32Q52 190 aa18.43■□□□□ 0.54
SYNGAP1-206ENST00000479510 IGLL5B9A064 214 aa18.43■□□□□ 0.54
SYNGAP1-206ENST00000479510 VCYO14598 125 aa18.43■□□□□ 0.54
SYNGAP1-206ENST00000479510 SAP30O75446 220 aa18.43■□□□□ 0.54
SYNGAP1-206ENST00000479510 TMEM141Q96I45 108 aa18.42■□□□□ 0.54
SYNGAP1-206ENST00000479510 AKAP6Q13023 2319 aa18.41■□□□□ 0.54
SYNGAP1-206ENST00000479510 TRBV6-5A0A0K0K1A5 114 aa18.41■□□□□ 0.54
SYNGAP1-206ENST00000479510 COTL1Q14019 142 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 SUMO4Q6EEV6 95 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 LGALS9O00182 355 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 C9orf85Q96MD7 179 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 KIR2DL4Q99706 377 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 PRADC1Q9BSG0 188 aa18.4■□□□□ 0.54
SYNGAP1-206ENST00000479510 IGIPA6NJ69 53 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 LGALS1P09382 135 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 SRD5A1P18405 259 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 ZFP2Q6ZN57 461 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 FOXI2Q6ZQN5 318 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 ZNF479Q96JC4 524 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 TIMM17AQ99595 171 aa18.39■□□□□ 0.53
SYNGAP1-206ENST00000479510 AVPP01185 164 aa18.38■□□□□ 0.53
SYNGAP1-206ENST00000479510 CD7P09564 240 aa18.38■□□□□ 0.53
SYNGAP1-206ENST00000479510 RIPPLY3P57055 190 aa18.38■□□□□ 0.53
SYNGAP1-206ENST00000479510 SNRPD3P62318 126 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-206ENST00000479510 SYT8Q8NBV8 401 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 TRAV12-3A0A0B4J271 114 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 A0A0J9YX75 114 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 TRBV27A0A0K0K1C4 114 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 DUSP14O95147 198 aaKnown RBP18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 PMVKQ15126 192 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 TP53TG1Q9Y2A0 90 aa18.37■□□□□ 0.53
SYNGAP1-206ENST00000479510 IGHV3-16A0A0C4DH30 117 aa18.36■□□□□ 0.53
SYNGAP1-206ENST00000479510 CRYGDP07320 174 aa18.36■□□□□ 0.53
SYNGAP1-206ENST00000479510 HERVK_113P61574 105 aa18.36■□□□□ 0.53
SYNGAP1-206ENST00000479510 RRN3P1Q2M238 152 aa18.36■□□□□ 0.53
SYNGAP1-206ENST00000479510 CACNA1AO00555 2505 aa18.36■□□□□ 0.53
SYNGAP1-206ENST00000479510 F8W1H4 67 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 COX6B1P14854 86 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 MUC4Q99102 2169 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 J3QLI3 93 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 K7EQG2 157 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 TSHBP01222 138 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 EDN2P20800 178 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 RNF152Q8N8N0 203 aa18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 ASH1LQ9NR48 2969 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-206ENST00000479510 TMEM238LA0A1B0GVL6 79 aa18.34■□□□□ 0.53
SYNGAP1-206ENST00000479510 A6NJY4 79 aa18.34■□□□□ 0.53
SYNGAP1-206ENST00000479510 SCGB2A2Q13296 93 aa18.34■□□□□ 0.53
SYNGAP1-206ENST00000479510 ZNF815PA8K554 130 aa18.34■□□□□ 0.53
SYNGAP1-206ENST00000479510 IGLV4-69A0A075B6H9 119 aa18.33■□□□□ 0.52
SYNGAP1-206ENST00000479510 SDHAF1A6NFY7 115 aa18.33■□□□□ 0.52
SYNGAP1-206ENST00000479510 F5H697 171 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms