RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TRIAP1O43715 76 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 CXCL1P09341 107 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 GZMBP10144 247 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 TCL1AP56279 114 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 RPS20P60866 119 aaKnown RBP4.84□□□□□ -1.63
USP48-208ENST00000479177 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
USP48-208ENST00000479177 MORN3Q6PF18 240 aaPredicted RBP4.84□□□□□ -1.63
USP48-208ENST00000479177 TSKUQ8WUA8 353 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 IMMP2LQ96T52 175 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 TUBA4BQ9H853 241 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 NAGKQ9UJ70 344 aa4.84□□□□□ -1.63
USP48-208ENST00000479177 XKRY2A2RUG3 117 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 FAM231BA6NCW3 169 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 ORM1P02763 201 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 CTRLP40313 264 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 NUTF2P61970 127 aaKnown RBP4.83□□□□□ -1.64
USP48-208ENST00000479177 TDRG1Q3Y452 100 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 ANXA2RQ3ZCQ2 193 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 C20orf144Q9BQM9 153 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 LINC00467Q9BRT7 94 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 XCL2Q9UBD3 114 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 URGCP-MRPS24S4R325 110 aa4.83□□□□□ -1.64
USP48-208ENST00000479177 TRAV9-1A0A075B6T8 112 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 IGHV1OR15-1A0A075B7D0 117 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
USP48-208ENST00000479177 TGIF2-C20orf24A0A0A6YYL0 155 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 HIGD1CA8MV81 97 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 A8MZ25 164 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 TYMSP04818 313 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 IGLC6P0CF74 106 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 S100PP25815 95 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 ASIPP42127 132 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 FAM3BP58499 235 aaPredicted RBP4.82□□□□□ -1.64
USP48-208ENST00000479177 ELOBQ15370 118 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 DNLZQ5SXM8 178 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 KCNIP4Q6PIL6 250 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 C1orf158Q8N1D5 194 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 FER1L6-AS1Q8NA97 138 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 CSNK1G2-AS1Q8NCQ2 148 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 NUP35Q8NFH5 326 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 PYGO2Q9BRQ0 406 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 CSTL1Q9H114 145 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 NAT8BQ9UHF3 227 aa4.82□□□□□ -1.64
USP48-208ENST00000479177 MUC4Q99102 2169 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 TRBV24-1A0A075B6N3 115 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 H3BVH4 76 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 SNAI2O43623 268 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 APOC4P55056 127 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
USP48-208ENST00000479177 FAM159AQ6UWV7 190 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 ZNF705AQ6ZN79 300 aaPredicted RBP4.81□□□□□ -1.64
USP48-208ENST00000479177 KCNS1Q96KK3 526 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 PGLYRP4Q96LB8 373 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 CNFNQ9BYD5 112 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 TP53TG3Q9ULZ0 132 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 GOLT1BQ9Y3E0 138 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
USP48-208ENST00000479177 A0A087WWL8 130 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 A0A1B0GUT8 65 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 CBY3A6NI87 242 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 COLCA2A8K830 154 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 GNRH2O43555 120 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 NXPH4O95158 308 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 OR5AL1P0C617 328 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 ARMS2P0C7Q2 107 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
USP48-208ENST00000479177 MRPL54Q6P161 138 aaKnown RBP4.8□□□□□ -1.64
USP48-208ENST00000479177 LYZL1Q6UWQ5 148 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 BTF3L4Q96K17 158 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 C9orf85Q96MD7 179 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 LINC01587Q99440 93 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 TMEM208Q9BTX3 173 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 TPPP3Q9BW30 176 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 SCRT2Q9NQ03 307 aa4.8□□□□□ -1.64
USP48-208ENST00000479177 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 F2Z2F3 143 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 K7EIL1 84 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 UBE2CO00762 179 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 SPINK4O60575 86 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 PRB2P02812 416 aaPredicted RBP4.79□□□□□ -1.64
USP48-208ENST00000479177 PRM2P04554 102 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 RAB5AP20339 215 aa4.79□□□□□ -1.64
USP48-208ENST00000479177 S100A4P26447 101 aaKnown RBP4.79□□□□□ -1.64
USP48-208ENST00000479177 HBBP68871 147 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms