RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 ABCA1O95477 2261 aa0.04□□□□□ -2.4
SYCP1-206ENST00000477590 CACNA1HO95180 2353 aa0.04□□□□□ -2.4
SYCP1-206ENST00000477590 HELZP42694 1942 aaKnown RBP0.03□□□□□ -2.4
SYCP1-206ENST00000477590 TFF1P04155 84 aa0.03□□□□□ -2.4
SYCP1-206ENST00000477590 RPS28P62857 69 aaKnown RBP0.03□□□□□ -2.4
SYCP1-206ENST00000477590 A0A1B0GW64 132 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 TCRBV3S1A0A5B6 114 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 MT-ND4LP03901 98 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 BANF2Q9H503 90 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 ARHGAP31Q2M1Z3 1444 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 JMJD1CQ15652 2540 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 NCOR2Q9Y618 2525 aa0.02□□□□□ -2.41
SYCP1-206ENST00000477590 TRAV2A0A0B4J234 112 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 RBP4P02753 201 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 TMEM91Q6ZNR0 172 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 SNX29P2Q8IUI4 249 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 GINS2Q9Y248 185 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 CCDC171Q6TFL3 1326 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 KDM5CP41229 1560 aa0.01□□□□□ -2.41
SYCP1-206ENST00000477590 SSPOA2VEC9 5147 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 IGSF10Q6WRI0 2623 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 TRAV36DV7A0A075B6V5 113 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 BORCS7-ASMTA0A0B4J1R7 106 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 CXorf51AA0A1B0GTR3 108 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 MAP2P11137 1827 aaKnown RBP0□□□□□ -2.41
SYCP1-206ENST00000477590 CMPK1P30085 196 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 MAGOHBQ96A72 148 aaKnown RBP0□□□□□ -2.41
SYCP1-206ENST00000477590 BPESC1Q9GZL8 116 aa0□□□□□ -2.41
SYCP1-206ENST00000477590 ELOF1P60002 83 aaKnown RBP-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 COX6A2Q02221 97 aa-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 OR8B8Q15620 311 aa-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 TMEM244Q5VVB8 128 aa-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 FAM213BQ8TBF2 198 aa-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 NOP16Q9Y3C1 178 aaKnown RBP-0.01□□□□□ -2.41
SYCP1-206ENST00000477590 RBAKDNA6NC62 111 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 HLA-DRB4P13762 266 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 EMX2Q04743 252 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 CYP2G1PQ6ZSU1 146 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 TCTE3Q8IZS6 198 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 DYNLRB2Q8TF09 96 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 DNAJC15Q9Y5T4 150 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 HLA-DRB4X5D2U9 266 aa-0.02□□□□□ -2.41
SYCP1-206ENST00000477590 DMBT1Q9UGM3 2413 aaPredicted RBP-0.03□□□□□ -2.41
SYCP1-206ENST00000477590 A0A1B0GX51 115 aa-0.03□□□□□ -2.41
SYCP1-206ENST00000477590 DEGS1O15121 323 aa-0.03□□□□□ -2.41
SYCP1-206ENST00000477590 YPEL1O60688 119 aa-0.03□□□□□ -2.41
SYCP1-206ENST00000477590 ATP6V0E2Q8NHE4 81 aa-0.03□□□□□ -2.41
SYCP1-206ENST00000477590 OTOGQ6ZRI0 2925 aa-0.03□□□□□ -2.42
SYCP1-206ENST00000477590 HRNRQ86YZ3 2850 aaPredicted RBP-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 SOGA1O94964 1423 aa-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 GNG14A0A1W2PPG7 69 aa-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 TNFSF15O95150 251 aa-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 SPANXCQ9NY87 97 aa-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 XIRP1Q702N8 1843 aaKnown RBP-0.04□□□□□ -2.42
SYCP1-206ENST00000477590 COL7A1Q02388 2944 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 H0YJX3 145 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 SCTP09683 121 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 SLC25A6P12236 298 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 NDUFA11Q86Y39 141 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 ABCA4P78363 2273 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 MYO7AQ13402 2215 aa-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 TNS1Q9HBL0 1735 aaKnown RBP-0.05□□□□□ -2.42
SYCP1-206ENST00000477590 LRP1Q07954 4544 aaKnown RBP-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 LAMC3Q9Y6N6 1575 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 CDK13Q14004 1512 aaKnown RBP-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 COX4I1P13073 169 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 CLLU1Q5K131 121 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 OR2T2Q6IF00 324 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 SPANXA1Q9NS26 97 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 ERG28Q9UKR5 140 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 HIGD1AQ9Y241 93 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 UHRF1BP1LA0JNW5 1464 aa-0.06□□□□□ -2.42
SYCP1-206ENST00000477590 CCDC153Q494R4 210 aa-0.07□□□□□ -2.42
SYCP1-206ENST00000477590 UNC13BO14795 1591 aa-0.07□□□□□ -2.42
SYCP1-206ENST00000477590 POLQO75417 2590 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 J3QLW9 94 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 APODP05090 189 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 SMIM11BQ8TCY0 68 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 IFI27L1Q96BM0 104 aa-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
SYCP1-206ENST00000477590 MED13LQ71F56 2210 aa-0.09□□□□□ -2.42
SYCP1-206ENST00000477590 GVQW2A0A096LPI5 108 aaPredicted RBP-0.09□□□□□ -2.42
SYCP1-206ENST00000477590 ATP11AUNQ6ZP68 121 aa-0.09□□□□□ -2.42
SYCP1-206ENST00000477590 PLXNA2O75051 1894 aa-0.1□□□□□ -2.42
SYCP1-206ENST00000477590 CCDC179H3BU77 68 aa-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 SSBP1Q04837 148 aaKnown RBP-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 FAM74A4Q5TZK3 123 aa-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 C4orf33Q8N1A6 199 aa-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 U3KQA8 63 aa-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 CACNA1CQ13936 2221 aa-0.1□□□□□ -2.43
SYCP1-206ENST00000477590 CASZ1Q86V15 1759 aa-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 F5P12259 2224 aa-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 DBIP07108 87 aaKnown RBP-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 NMBP08949 121 aa-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 NBEAP1P0C6P0 100 aa-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 MRPL40Q9NQ50 206 aaKnown RBP-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 TMEM242Q9NWH2 141 aa-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 VIRMAQ69YN4 1812 aaKnown RBP-0.11□□□□□ -2.43
SYCP1-206ENST00000477590 CCL3L1P16619 93 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms