RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MUC4Q99102 2169 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 COL24A1Q17RW2 1714 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 IGLV3-9A0A075B6K5 115 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 TRGV5A0A0B4J1U4 118 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 ZNF705FA8MVS1 300 aaPredicted RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 LEPROTO15243 131 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 HIST1H2BKO60814 126 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SNCGO76070 127 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 NDUFB2O95178 105 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 TCL1BO95988 128 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 RBP4P02753 201 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 HIST1H2BJP06899 126 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 CD7P09564 240 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 LINC00032P0C843 101 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 ZNF705BP0CI00 300 aaPredicted RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 SLC25A4P12235 298 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 COX7CP15954 63 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SLC25A16P16260 332 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 ADCYAP1P18509 176 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 S100A4P26447 101 aaKnown RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 HLA-DMBP28068 263 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SNCAP37840 140 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 TMEM155Q4W5P6 130 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 OR2T2Q6IF00 324 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 PATE2Q6UY27 113 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 ATP6V0E2Q8NHE4 81 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 ZNF431Q8TF32 576 aaPredicted RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 DIRC1Q969H9 104 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 RAB37Q96AX2 223 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 AQP10Q96PS8 301 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 AMELYQ99218 206 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 UPK3BQ9BT76 320 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SPANXDQ9BXN6 97 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 NPCDR1Q9BY65 106 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SLC35B3Q9H1N7 401 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SMDT1Q9H4I9 107 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SLC39A9Q9NUM3 307 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 AP4S1Q9Y587 144 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 TANC1Q9C0D5 1861 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 HEATR5BQ9P2D3 2071 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 KIF14Q15058 1648 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 SIPA1L3O60292 1781 aaPredicted RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 RGPD2P0DJD1 1756 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 PLXNA1Q9UIW2 1896 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 CTTNBP2Q8WZ74 1663 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SCAF11Q99590 1463 aaKnown RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 IGHV3-73A0A0B4J1V6 119 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 hADV29S1A0JD25 119 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 TMEM235A6NFC5 223 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 A6NN06 94 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 F8W1H4 67 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 M0R233 179 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 GNGT2O14610 69 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 NUPR1O60356 82 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 ZNF737O75373 536 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 HYPMO75409 117 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SIX6O95475 246 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 GYPBP06028 91 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 IGLC2P0DOY2 106 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 IGLC3P0DOY3 106 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 CCL3P10147 92 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 COX6A1P12074 109 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 CCL5P13501 91 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 CBLN1P23435 193 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 NFYAP23511 347 aaPredicted RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 PEBP1P30086 187 aaKnown RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 TSPEAR-AS2P59090 65 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 PCBD1P61457 104 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 NPC2P61916 151 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 INSL4Q14641 139 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 LINC01545Q5VT33 79 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 HEPN1Q6WQI6 88 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SLC25A26Q70HW3 274 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 FAM213BQ8TBF2 198 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 COPS9Q8WXC6 57 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 FGF13Q92913 245 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 S100A16Q96FQ6 103 aaKnown RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 ZNF714Q96N38 554 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 PMCHL2Q9BQD1 86 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 DPH3P1Q9H4G8 78 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 OSTCQ9NRP0 149 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 MALRD1Q5VYJ5 2156 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SHROOM2Q13796 1616 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 ABCA6Q8N139 1617 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 LAMB1P07942 1786 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SETBP1Q9Y6X0 1596 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 DOCK11Q5JSL3 2073 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 NINQ8N4C6 2090 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 RGPD1P0DJD0 1748 aa0.95□□□□□ -2.26
VPS50-213ENST00000477572 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 PDCD11Q14690 1871 aaKnown RBP0.95□□□□□ -2.26
VPS50-213ENST00000477572 CUX1P39880 1505 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 CROCC2H7BZ55 1655 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 USP54Q70EL1 1684 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 ATP10BO94823 1461 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 MUC22E2RYF6 1773 aaPredicted RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 RGPD8O14715 1765 aaPredicted RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 RGPD5Q99666 1765 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 DLG5Q8TDM6 1919 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 A0A087WXM4 84 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms