RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NCOR1P1Q9H4R4 102 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
VAPB-204ENST00000475243 IGLC2P0DOY2 106 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 GYPEP15421 78 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 Q9H8V8 135 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
VAPB-204ENST00000475243 WIPF2Q8TF74 440 aaPredicted RBP8.58□□□□□ -1.04
VAPB-204ENST00000475243 LTAP01374 205 aa8.58□□□□□ -1.04
VAPB-204ENST00000475243 OR11H6Q8NGC7 330 aa8.58□□□□□ -1.04
VAPB-204ENST00000475243 GP9P14770 177 aa8.58□□□□□ -1.04
VAPB-204ENST00000475243 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
VAPB-204ENST00000475243 NBL1P41271 181 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 AJUBAQ96IF1 538 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 KLF2Q9Y5W3 355 aaPredicted RBP8.57□□□□□ -1.04
VAPB-204ENST00000475243 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 A0A1W2PPM0 123 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 DEFB4AO15263 64 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 NPSP0C0P6 89 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
VAPB-204ENST00000475243 F8W1H4 67 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 PRB2P02812 416 aaPredicted RBP8.56□□□□□ -1.04
VAPB-204ENST00000475243 IGHV7-81A0A0B4J1V7 117 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 IGLV3-1P01715 115 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 K7EP13 123 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 TRACP01848 142 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 SRSF2Q01130 221 aaKnown RBP8.56□□□□□ -1.04
VAPB-204ENST00000475243 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
VAPB-204ENST00000475243 TIMM17AQ99595 171 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 PRR20EP86478 221 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 PRR20CP86479 221 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 PRR20DP86480 221 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 PRR20BP86481 221 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 PRR20AP86496 221 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 TECTAO75443 2155 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 H3BUA1 57 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 C15orf53Q8NAA6 179 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 IFITM1P13164 125 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 FGF23Q9GZV9 251 aaPredicted RBP8.55□□□□□ -1.04
VAPB-204ENST00000475243 CRYBA4P53673 196 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 C12orf74Q32Q52 190 aa8.55□□□□□ -1.04
VAPB-204ENST00000475243 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 A0A087WW49 117 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 K7EMI3 77 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 BAALC-AS2P0C853 105 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 MRPL52Q86TS9 123 aaKnown RBP8.54□□□□□ -1.04
VAPB-204ENST00000475243 ZNF493Q6ZR52 646 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
VAPB-204ENST00000475243 DEFB1P60022 68 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 UTF1Q5T230 341 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 SPART-AS1P0CW21 52 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 MSRB1Q9NZV6 116 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 K7EP34 96 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 CCL18P55774 89 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 HIVEP2P31629 2446 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
VAPB-204ENST00000475243 POU2AF1Q16633 256 aa8.52□□□□□ -1.04
VAPB-204ENST00000475243 HIST2H2BCQ6DN03 193 aa8.52□□□□□ -1.04
VAPB-204ENST00000475243 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
VAPB-204ENST00000475243 K7EIM0 57 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 DAND5Q8N907 189 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 NPBQ8NG41 125 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 C16orf74Q96GX8 76 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 CLPSL1A2RUU4 121 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 Q6ZVH6 145 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 ICOSQ9Y6W8 199 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 K7EQD1 137 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 C5orf56Q8N8D9 126 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 EML5Q05BV3 1969 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 I3L2K1 104 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 ADORA2A-AS1P86434 159 aa8.52□□□□□ -1.05
VAPB-204ENST00000475243 COX7B2Q8TF08 81 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
VAPB-204ENST00000475243 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 NOTCH2Q04721 2471 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms