RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 FER1L6Q2WGJ9 1857 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 SPAG17Q6Q759 2223 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 CPDO75976 1380 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 IGSF10Q6WRI0 2623 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 TSTD3H0UI37 97 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 FAM74A4Q5TZK3 123 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 SMIM15Q7Z3B0 74 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 NDUFA11Q86Y39 141 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 SMIM11BQ8TCY0 68 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 SPANXCQ9NY87 97 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 ERG28Q9UKR5 140 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 KDM5CP41229 1560 aa-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 DMBT1Q9UGM3 2413 aaPredicted RBP-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 TNS1Q9HBL0 1735 aaKnown RBP-0.04□□□□□ -2.42
ECHDC1-213ENST00000474240 IGF2RP11717 2491 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 LRP5O75197 1615 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 ABCA12Q86UK0 2595 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 A0A1B0GW64 132 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 J3KT08 172 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 TCRAP04437 139 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 SLC25A5P05141 298 aaKnown RBP-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 PAEPP09466 180 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 RPL7P18124 248 aaKnown RBP-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 SLC25A26Q70HW3 274 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 TMEM242Q9NWH2 141 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 SCP2D1Q9UJQ7 156 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 KIDINS220Q9ULH0 1771 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 OVOS2A0A0G2JMS6 1433 aa-0.05□□□□□ -2.42
ECHDC1-213ENST00000474240 NEBP20929 6669 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 SLC48A1Q6P1K1 146 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 SNX29P2Q8IUI4 249 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 DYNLRB2Q8TF09 96 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 NDUFAF1Q9Y375 327 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 NOP16Q9Y3C1 178 aaKnown RBP-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 CACNA1CQ13936 2221 aa-0.06□□□□□ -2.42
ECHDC1-213ENST00000474240 UHRF1BP1LA0JNW5 1464 aa-0.07□□□□□ -2.42
ECHDC1-213ENST00000474240 BANF2Q9H503 90 aa-0.07□□□□□ -2.42
ECHDC1-213ENST00000474240 SPANXA1Q9NS26 97 aa-0.07□□□□□ -2.42
ECHDC1-213ENST00000474240 HSPB11Q9Y547 144 aa-0.07□□□□□ -2.42
ECHDC1-213ENST00000474240 WDR97A6NE52 1622 aa-0.07□□□□□ -2.42
ECHDC1-213ENST00000474240 CACNA1HO95180 2353 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 HRNRQ86YZ3 2850 aaPredicted RBP-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 MUC12Q9UKN1 5478 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 CCDC179H3BU77 68 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 FABP1P07148 127 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 NMBP08949 121 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 SSBP1Q04837 148 aaKnown RBP-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 OR8B8Q15620 311 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 ATP6V0E2Q8NHE4 81 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 SELENOSQ9BQE4 189 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 PIEZO1Q92508 2521 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 COL7A1Q02388 2944 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 PBRM1Q86U86 1689 aa-0.08□□□□□ -2.42
ECHDC1-213ENST00000474240 ARHGAP31Q2M1Z3 1444 aa-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 J3QLW9 94 aa-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 CFDP00746 253 aaPredicted RBP-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 ELOF1P60002 83 aaKnown RBP-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 EMX2Q04743 252 aa-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 C4orf33Q8N1A6 199 aa-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 DDA1Q9BW61 102 aa-0.09□□□□□ -2.42
ECHDC1-213ENST00000474240 ZNF142P52746 1687 aaPredicted RBP-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 CXorf51AA0A1B0GTR3 108 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 CMPK1P30085 196 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 TMEM91Q6ZNR0 172 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 TCTE3Q8IZS6 198 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 SMPXQ9UHP9 88 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 V9GYV3 84 aa-0.1□□□□□ -2.43
ECHDC1-213ENST00000474240 JMJD1CQ15652 2540 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 TRBV7-1A0A0A6YYK4 115 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 HLA-DRB4P13762 266 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 ACYP2P14621 99 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 GCHFRP30047 84 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 RPS28P62857 69 aaKnown RBP-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 HLA-DRB4X5D2U9 266 aa-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 HELZP42694 1942 aaKnown RBP-0.11□□□□□ -2.43
ECHDC1-213ENST00000474240 VIRMAQ69YN4 1812 aaKnown RBP-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 TRAV36DV7A0A075B6V5 113 aa-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 GVQW2A0A096LPI5 108 aaPredicted RBP-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 CCDC153Q494R4 210 aa-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 OR2T2Q6IF00 324 aa-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 CTAGE3PQ8IX95 158 aa-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 HIVEP3Q5T1R4 2406 aa-0.12□□□□□ -2.43
ECHDC1-213ENST00000474240 MYO7AQ13402 2215 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 OTOGQ6ZRI0 2925 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 A0A1B0GX51 115 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 DEGS1O15121 323 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 TFF1P04155 84 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 DBIP07108 87 aaKnown RBP-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 SMIM6P0DI80 62 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 SLC25A6P12236 298 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 CCL3L1P16619 93 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 S100A5P33763 92 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 SPCS2Q15005 226 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 CLLU1Q5K131 121 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 COX7B2Q8TF08 81 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 GINS2Q9Y248 185 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 ASXL3Q9C0F0 2248 aa-0.13□□□□□ -2.43
ECHDC1-213ENST00000474240 LRP1Q07954 4544 aaKnown RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms