RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 ZNF714Q96N38 554 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 ODF3Q96PU9 254 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 DSCR8Q96T75 97 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 UPK3BQ9BT76 320 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 PLA2G12AQ9BZM1 189 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 TAS2R4Q9NYW5 299 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 SLX4Q8IY92 1834 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 HEATR1Q9H583 2144 aaKnown RBP2.26□□□□□ -2.05
SCN3A-207ENST00000471697 LTBP1Q14766 1721 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 PKD1L3Q7Z443 1732 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 UBR1Q8IWV7 1749 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 ARID1AO14497 2285 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 NOTCH2Q04721 2471 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 ADGRB2O60241 1585 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 SAMD9LQ8IVG5 1584 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IGLV3-10A0A075B6K4 115 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV3-49A0A0A0MS15 119 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV3-21A0A0B4J1V1 117 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 TRAV3A0A0B4J244 114 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 TCRBV4S1A1TA0A5B7 111 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IBA57-AS1B1ANH7 110 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 TIMM17BO60830 172 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CPSF4O95639 269 aaKnown RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 INSP01308 110 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IL4P05112 153 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 GIG44P09565 113 aaPredicted RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CCL4P13236 92 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 NPPCP23582 126 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 RNASE4P34096 147 aaKnown RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 RPL30P62888 115 aaKnown RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 MRPL51Q4U2R6 128 aaKnown RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 SLC48A1Q6P1K1 146 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 C7orf65Q6ZTY9 151 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 ZFAND2AQ8N6M9 145 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CD177Q8N6Q3 437 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 DYNLRB2Q8TF09 96 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 DIRC1Q969H9 104 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 IFI27L1Q96BM0 104 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 C16orf74Q96GX8 76 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 NPCDR1Q9BY65 106 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 DEFB126Q9BYW3 111 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CELA1Q9UNI1 258 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 HHLA3Q9XRX5 114 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 PHLDA3Q9Y5J5 127 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 COL14A1Q05707 1796 aaKnown RBP2.25□□□□□ -2.05
SCN3A-207ENST00000471697 ANKRD36A6QL64 1941 aa2.25□□□□□ -2.05
SCN3A-207ENST00000471697 CPAMD8Q8IZJ3 1885 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 ALKQ9UM73 1620 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 NCOA6Q14686 2063 aaPredicted RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 LAMB2P55268 1798 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 MYMXA0A1B0GTQ4 84 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 E7EQL1 145 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 K7ERS5 55 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 CCKP06307 115 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV4-34P06331 123 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 SAA1P0DJI8 122 aaPredicted RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV3-30-3P0DP02 117 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 PEBP1P30086 187 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 RPL27AP46776 148 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 BLCAPP62952 87 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 CIRBPQ14011 172 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 INSL4Q14641 139 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 Q1T7F1 81 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 ZC2HC1BQ5TFG8 222 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 Q6ZQT7 251 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 Q8N8P6 123 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 WFDC5Q8TCV5 224 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 SMIM7Q9BQ49 75 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 FAM103A1Q9BTL3 118 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 CXCL16Q9H2A7 254 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 C11orf1Q9H5F2 150 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 MRPL35Q9NZE8 188 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 TP53TG3Q9ULZ0 132 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 EPDR1Q9UM22 224 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 COL5A3P25940 1745 aaPredicted RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 PARP4Q9UKK3 1724 aaKnown RBP2.24□□□□□ -2.05
SCN3A-207ENST00000471697 PCNX2A6NKB5 2137 aa2.24□□□□□ -2.05
SCN3A-207ENST00000471697 COL18A1P39060 1754 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 TCF20Q9UGU0 1960 aaKnown RBP2.23□□□□□ -2.05
SCN3A-207ENST00000471697 GREB1Q4ZG55 1949 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 MPDZO75970 2070 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 C3P01024 1663 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 SHPRHQ149N8 1683 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 COL1A1P02452 1464 aaPredicted RBP2.23□□□□□ -2.05
SCN3A-207ENST00000471697 A0A087WYN8 130 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 A0A1B0GWA3 101 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 LEPROTO15243 131 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 IGKV3-20P01619 116 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 CCL3P10147 92 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 RNASE2P10153 161 aaKnown RBP2.23□□□□□ -2.05
SCN3A-207ENST00000471697 GCHFRP30047 84 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 TSPEAR-AS2P59090 65 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 KRTAP10-3P60369 221 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 UBE2D3P61077 147 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms