RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SSBP4Q9BWG4 385 aaPredicted RBP13.76□□□□□ -0.21
PSPC1-203ENST00000471658 NOP10Q9NPE3 64 aaKnown RBP13.76□□□□□ -0.21
PSPC1-203ENST00000471658 SCRT2Q9NQ03 307 aa13.76□□□□□ -0.21
PSPC1-203ENST00000471658 SCO1O75880 301 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
PSPC1-203ENST00000471658 NUP35Q8NFH5 326 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 GFRA4Q9GZZ7 299 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 ZMAT4Q9H898 229 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 SNURFLB1AK76 121 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 SNAI2O43623 268 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 SPINK4O60575 86 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 TMEM242Q9NWH2 141 aa13.75□□□□□ -0.21
PSPC1-203ENST00000471658 A0A1W2PPQ1 181 aa13.74□□□□□ -0.21
PSPC1-203ENST00000471658 OR5AL1P0C617 328 aa13.74□□□□□ -0.21
PSPC1-203ENST00000471658 MUC4Q99102 2169 aa13.74□□□□□ -0.21
PSPC1-203ENST00000471658 MRPL16Q9NX20 251 aaKnown RBP13.74□□□□□ -0.21
PSPC1-203ENST00000471658 URGCP-MRPS24S4R325 110 aa13.74□□□□□ -0.21
PSPC1-203ENST00000471658 FAM231BA6NCW3 169 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 DMRTA1Q5VZB9 504 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 TMEM88Q6PEY1 159 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 NAT8BQ9UHF3 227 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 PHLDA3Q9Y5J5 127 aa13.73□□□□□ -0.21
PSPC1-203ENST00000471658 M0R381 172 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 CTRLP40313 264 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 SPXQ9BT56 116 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 MSRB1Q9NZV6 116 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 A0A0J9YWU9 116 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
PSPC1-203ENST00000471658 Q6ZTI0 123 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 CELA1Q9UNI1 258 aa13.72□□□□□ -0.21
PSPC1-203ENST00000471658 TRGV1A0A0A0MS02 117 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 F2Z2F3 143 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 M0R2P5 195 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 ZNF876PQ49A33 203 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 SPANXN1Q5VSR9 72 aa13.71□□□□□ -0.22
PSPC1-203ENST00000471658 COL7A1Q02388 2944 aa13.7□□□□□ -0.22
PSPC1-203ENST00000471658 NTF3P20783 257 aa13.7□□□□□ -0.22
PSPC1-203ENST00000471658 IMMP2LQ96T52 175 aa13.7□□□□□ -0.22
PSPC1-203ENST00000471658 JPT2Q9H910 190 aa13.7□□□□□ -0.22
PSPC1-203ENST00000471658 NHLRC4P0CG21 123 aaPredicted RBP13.69□□□□□ -0.22
PSPC1-203ENST00000471658 MRPL54Q6P161 138 aaKnown RBP13.69□□□□□ -0.22
PSPC1-203ENST00000471658 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
PSPC1-203ENST00000471658 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 GAGE7O76087 117 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 FBN3Q75N90 2809 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 A0A1B0GUT8 65 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 TWIST1Q15672 202 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 KCNIP4Q6PIL6 250 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 CNFNQ9BYD5 112 aa13.68□□□□□ -0.22
PSPC1-203ENST00000471658 C11orf68Q9H3H3 251 aaKnown RBP13.68□□□□□ -0.22
PSPC1-203ENST00000471658 IGHV4-4A0A075B6R2 117 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 NXPH4O95158 308 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 DEFB130BP0DP73 79 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 DEFB130AP0DP74 79 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 S100PP25815 95 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 CACNG7P62955 275 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 ELOBQ15370 118 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 RASL10AQ92737 203 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
PSPC1-203ENST00000471658 TGIF2-C20orf24A0A0A6YYL0 155 aa13.66□□□□□ -0.22
PSPC1-203ENST00000471658 WDR73Q6P4I2 378 aa13.66□□□□□ -0.22
PSPC1-203ENST00000471658 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
PSPC1-203ENST00000471658 PTH2Q96A98 100 aa13.66□□□□□ -0.22
PSPC1-203ENST00000471658 YPEL4Q96NS1 127 aa13.66□□□□□ -0.22
PSPC1-203ENST00000471658 LYRM9A8MSI8 78 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 LGALS9BQ3B8N2 356 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 POM121L12Q8N7R1 296 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 BORCS7Q96B45 105 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 SAMD10Q9BYL1 202 aa13.65□□□□□ -0.22
PSPC1-203ENST00000471658 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 CAMPP49913 170 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 RIGQ13278 110 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 LINC00612Q8N6U2 182 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 IGHV3-53P01767 116 aa13.64□□□□□ -0.23
PSPC1-203ENST00000471658 A0A087WWL8 130 aa13.63□□□□□ -0.23
PSPC1-203ENST00000471658 EVI2AP22794 236 aa13.63□□□□□ -0.23
PSPC1-203ENST00000471658 C14orf178Q8N769 122 aaPredicted RBP13.63□□□□□ -0.23
PSPC1-203ENST00000471658 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
PSPC1-203ENST00000471658 RS1O15537 224 aa13.62□□□□□ -0.23
PSPC1-203ENST00000471658 C12orf74Q32Q52 190 aa13.62□□□□□ -0.23
PSPC1-203ENST00000471658 CFAP126Q5VTH2 177 aa13.62□□□□□ -0.23
PSPC1-203ENST00000471658 U3KQK5 164 aa13.62□□□□□ -0.23
PSPC1-203ENST00000471658 IGHV3-73A0A0B4J1V6 119 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 DAD1P61803 113 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 ZNF479Q96JC4 524 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 TRAV9-1A0A075B6T8 112 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 CRYGDP07320 174 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
PSPC1-203ENST00000471658 HBBP68871 147 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms