RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-203ENST00000469739 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 HERV-K104P63124 156 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 RIGQ13278 110 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
TOP3A-203ENST00000469739 RNF223E7ERA6 249 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 NPIPB6E9PJ23 425 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 MALP21145 153 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 OR9G4Q8NGQ1 327 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 SMIM13P0DJ93 91 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 OR4X2Q8NGF9 303 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 UFC1Q9Y3C8 167 aa7.22□□□□□ -1.25
TOP3A-203ENST00000469739 BAHCC1Q9P281 2608 aa7.21□□□□□ -1.25
TOP3A-203ENST00000469739 TRAV26-2A0A0B4J265 109 aa7.21□□□□□ -1.25
TOP3A-203ENST00000469739 M0QXV9 152 aa7.21□□□□□ -1.25
TOP3A-203ENST00000469739 PDE6HQ13956 83 aa7.21□□□□□ -1.25
TOP3A-203ENST00000469739 SPANXB1Q9NS25 103 aaPredicted RBP7.21□□□□□ -1.25
TOP3A-203ENST00000469739 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.25
TOP3A-203ENST00000469739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
TOP3A-203ENST00000469739 HAX1O00165 279 aa7.21□□□□□ -1.26
TOP3A-203ENST00000469739 CKS2P33552 79 aa7.21□□□□□ -1.26
TOP3A-203ENST00000469739 SEC61GP60059 68 aa7.21□□□□□ -1.26
TOP3A-203ENST00000469739 C11orf44Q8N8P7 122 aa7.21□□□□□ -1.26
TOP3A-203ENST00000469739 NDFIP1Q9BT67 221 aa7.21□□□□□ -1.26
TOP3A-203ENST00000469739 TRAV8-2A0A0B4J237 113 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 WFDC2Q14508 124 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 DEFB112Q30KQ8 113 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
TOP3A-203ENST00000469739 ZNF747Q9BV97 191 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
TOP3A-203ENST00000469739 TMEM78Q5T7P6 136 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 PRELID3AQ96N28 172 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 GFRA4Q9GZZ7 299 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 F8W1H4 67 aa7.2□□□□□ -1.26
TOP3A-203ENST00000469739 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
TOP3A-203ENST00000469739 NPYP01303 97 aa7.19□□□□□ -1.26
TOP3A-203ENST00000469739 ETDBQ3ZM63 59 aa7.19□□□□□ -1.26
TOP3A-203ENST00000469739 MRPL51Q4U2R6 128 aaKnown RBP7.19□□□□□ -1.26
TOP3A-203ENST00000469739 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
TOP3A-203ENST00000469739 FABP5P3A8MUU1 101 aa7.19□□□□□ -1.26
TOP3A-203ENST00000469739 PRR9Q5T870 116 aa7.19□□□□□ -1.26
TOP3A-203ENST00000469739 TRBV7-1A0A0A6YYK4 115 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 H3BVH4 76 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 TSPAN13O95857 204 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 B4DSR2 109 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 M0R381 172 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 GCSHP23434 173 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 SIGLEC8Q9NYZ4 499 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 DUX3Q96PT4 197 aa7.18□□□□□ -1.26
TOP3A-203ENST00000469739 OR11H12B2RN74 326 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 COX6B1P14854 86 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 NMUP48645 174 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 SRSF1Q07955 248 aaKnown RBP eCLIP7.17□□□□□ -1.263e-7■■■□□ 17.9
TOP3A-203ENST00000469739 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 OR11H2Q8NH07 326 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 ZNF418Q8TF45 676 aaPredicted RBP7.17□□□□□ -1.26
TOP3A-203ENST00000469739 RHPN1-AS1Q9BWJ2 59 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 SS18L2Q9UHA2 77 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 GCN1Q92616 2671 aaKnown RBP7.17□□□□□ -1.26
TOP3A-203ENST00000469739 RNASE4P34096 147 aaKnown RBP7.17□□□□□ -1.26
TOP3A-203ENST00000469739 DGAT2L7PQ6IED9 249 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
TOP3A-203ENST00000469739 KMT2BQ9UMN6 2715 aaPredicted RBP7.17□□□□□ -1.26
TOP3A-203ENST00000469739 TRAV25A0A0B4J276 109 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 FXYD2P54710 66 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 ORMDL3Q8N138 153 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 A6NDX4 124 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 K7ERJ3 54 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 HTN1P15515 57 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 GATA3P23771 443 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 H3BMG7 143 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 S100A4P26447 101 aaKnown RBP7.16□□□□□ -1.26
TOP3A-203ENST00000469739 INSL3P51460 131 aa7.16□□□□□ -1.26
TOP3A-203ENST00000469739 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 IGHG2P01859 326 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 SPINK8P0C7L1 97 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 ZNF688P0C7X2 276 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 CACNG7P62955 275 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 LGALS9BQ3B8N2 356 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 LGALS9CQ6DKI2 356 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
TOP3A-203ENST00000469739 GNRH2O43555 120 aa7.15□□□□□ -1.27
TOP3A-203ENST00000469739 RNF183Q96D59 192 aa7.15□□□□□ -1.27
TOP3A-203ENST00000469739 SLC50A1Q9BRV3 221 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms