RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 H3BMG7 143 aa10.96□□□□□ -0.65
SEC16A-208ENST00000467838 ARL3P36405 182 aa10.96□□□□□ -0.65
SEC16A-208ENST00000467838 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.65
SEC16A-208ENST00000467838 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.65
SEC16A-208ENST00000467838 IGHV1-69DA0A0B4J2H0 117 aa10.96□□□□□ -0.66
SEC16A-208ENST00000467838 ANXA2RQ3ZCQ2 193 aa10.96□□□□□ -0.66
SEC16A-208ENST00000467838 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.66
SEC16A-208ENST00000467838 PHLDA3Q9Y5J5 127 aa10.96□□□□□ -0.66
SEC16A-208ENST00000467838 SPTBN1Q01082 2364 aaKnown RBP10.96□□□□□ -0.66
SEC16A-208ENST00000467838 CSMD1Q96PZ7 3565 aa10.95□□□□□ -0.66
SEC16A-208ENST00000467838 PRSS29PA6NIE9 313 aa10.95□□□□□ -0.66
SEC16A-208ENST00000467838 LINC01549A6NIU2 74 aa10.95□□□□□ -0.66
SEC16A-208ENST00000467838 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
SEC16A-208ENST00000467838 UNQ9165/PRO28630Q6UXU0 137 aa10.95□□□□□ -0.66
SEC16A-208ENST00000467838 C14orf178Q8N769 122 aaPredicted RBP10.95□□□□□ -0.66
SEC16A-208ENST00000467838 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 A0A087WW49 117 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
SEC16A-208ENST00000467838 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
SEC16A-208ENST00000467838 UBE2D1P51668 147 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 KLK15Q9H2R5 256 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 CFAP46Q8IYW2 2715 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 H3BUA1 57 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 LINC00315P59091 139 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 SIGMAR1Q99720 223 aa10.94□□□□□ -0.66
SEC16A-208ENST00000467838 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
SEC16A-208ENST00000467838 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 GAGE12HA6NDE8 117 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 A6NJY4 79 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 AZU1P20160 251 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
SEC16A-208ENST00000467838 CYSLTR1Q9Y271 337 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
SEC16A-208ENST00000467838 HOXA3O43365 443 aaPredicted RBP10.92□□□□□ -0.66
SEC16A-208ENST00000467838 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 CRYGDP07320 174 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 ETDBQ3ZM63 59 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 ZNF815PA8K554 130 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 MGPP08493 103 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 USMG5Q96IX5 58 aa10.92□□□□□ -0.66
SEC16A-208ENST00000467838 J3KRW8 73 aa10.91□□□□□ -0.66
SEC16A-208ENST00000467838 TSHBP01222 138 aa10.91□□□□□ -0.66
SEC16A-208ENST00000467838 MED13LQ71F56 2210 aa10.91□□□□□ -0.66
SEC16A-208ENST00000467838 IGIPA6NJ69 53 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 KLLNB2CW77 178 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 SPRY2O43597 315 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 CD7P09564 240 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 POLR2KP53803 58 aaKnown RBP10.9□□□□□ -0.66
SEC16A-208ENST00000467838 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 PGPEP1Q9NXJ5 209 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 C19orf84I3L1E1 186 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 DUSP14O95147 198 aaKnown RBP10.9□□□□□ -0.66
SEC16A-208ENST00000467838 RNASE4P34096 147 aaKnown RBP10.9□□□□□ -0.66
SEC16A-208ENST00000467838 UBE2D3P61077 147 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 UBE2D2P62837 147 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 CFAP126Q5VTH2 177 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 GTSF1LQ9H1H1 148 aa10.9□□□□□ -0.66
SEC16A-208ENST00000467838 MUC4Q99102 2169 aa10.9□□□□□ -0.67
SEC16A-208ENST00000467838 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
SEC16A-208ENST00000467838 GNRH2O43555 120 aa10.89□□□□□ -0.67
SEC16A-208ENST00000467838 DEFB1P60022 68 aa10.89□□□□□ -0.67
SEC16A-208ENST00000467838 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
SEC16A-208ENST00000467838 TMEM141Q96I45 108 aa10.89□□□□□ -0.67
SEC16A-208ENST00000467838 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
SEC16A-208ENST00000467838 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 UBTD1Q9HAC8 227 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
SEC16A-208ENST00000467838 LINC00527Q9UJ94 153 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 ABCA2Q9BZC7 2435 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 CIDEAO60543 219 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 TSPAN13O95857 204 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 IGHG2P01859 326 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 HERVK_113P61574 105 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 PMVKQ15126 192 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 ZFP2Q6ZN57 461 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
SEC16A-208ENST00000467838 A0A0J9YY99 117 aa10.87□□□□□ -0.67
SEC16A-208ENST00000467838 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
SEC16A-208ENST00000467838 F6UB75 175 aa10.87□□□□□ -0.67
SEC16A-208ENST00000467838 NDUFS8O00217 210 aa10.87□□□□□ -0.67
SEC16A-208ENST00000467838 SMCPP49901 116 aaPredicted RBP10.87□□□□□ -0.67
SEC16A-208ENST00000467838 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
SEC16A-208ENST00000467838 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
SEC16A-208ENST00000467838 LYRM7Q5U5X0 104 aa10.86□□□□□ -0.67
SEC16A-208ENST00000467838 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
SEC16A-208ENST00000467838 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
SEC16A-208ENST00000467838 TRBV27A0A0K0K1C4 114 aa10.85□□□□□ -0.67
SEC16A-208ENST00000467838 LGALS9O00182 355 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms