RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 POLR2JP52435 117 aaKnown RBP0.24□□□□□ -2.37
ATG3-204ENST00000467275 SLC35B3Q9H1N7 401 aa0.24□□□□□ -2.37
ATG3-204ENST00000467275 KIF13AQ9H1H9 1805 aa0.24□□□□□ -2.37
ATG3-204ENST00000467275 CDK12Q9NYV4 1490 aaPredicted RBP0.23□□□□□ -2.37
ATG3-204ENST00000467275 BLMP54132 1417 aaPredicted RBP0.23□□□□□ -2.37
ATG3-204ENST00000467275 OR2H2O95918 312 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 CMPK1P30085 196 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 AKR1D1P51857 326 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 TCTE3Q8IZS6 198 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 PPDPFLQ8WWR9 84 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 MAGOHBQ96A72 148 aaKnown RBP0.23□□□□□ -2.37
ATG3-204ENST00000467275 BANF2Q9H503 90 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 TMEM14BQ9NUH8 114 aa0.23□□□□□ -2.37
ATG3-204ENST00000467275 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
ATG3-204ENST00000467275 TRAV2A0A0B4J234 112 aa0.22□□□□□ -2.37
ATG3-204ENST00000467275 DBIP07108 87 aaKnown RBP0.22□□□□□ -2.37
ATG3-204ENST00000467275 CCDC153Q494R4 210 aa0.22□□□□□ -2.37
ATG3-204ENST00000467275 TAS2R8Q9NYW2 309 aa0.22□□□□□ -2.37
ATG3-204ENST00000467275 KDM5CP41229 1560 aa0.22□□□□□ -2.37
ATG3-204ENST00000467275 VIRMAQ69YN4 1812 aaKnown RBP0.22□□□□□ -2.37
ATG3-204ENST00000467275 UHRF1BP1LA0JNW5 1464 aa0.22□□□□□ -2.37
ATG3-204ENST00000467275 ANKRD30AQ9BXX3 1397 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 MYH6P13533 1939 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 PLXNA1Q9UIW2 1896 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 TRAV17A0A0B4J275 112 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 SCGB1A1P11684 91 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 MORN2Q502X0 79 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 AKAP14Q86UN6 197 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 TSKUQ8WUA8 353 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 PYDC1Q8WXC3 89 aa0.21□□□□□ -2.38
ATG3-204ENST00000467275 TEX49A0A1B0GTD5 131 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 TFF1P04155 84 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 MPC1LP0DKB6 136 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 SPINK6Q6UWN8 80 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 ATP11AUNQ6ZP68 121 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 ATP6V0E2Q8NHE4 81 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 DYNLRB2Q8TF09 96 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 VPS25Q9BRG1 176 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 BDP1A6H8Y1 2624 aa0.2□□□□□ -2.38
ATG3-204ENST00000467275 ZNF142P52746 1687 aaPredicted RBP0.2□□□□□ -2.38
ATG3-204ENST00000467275 KIAA0100Q14667 2235 aaKnown RBP0.19□□□□□ -2.38
ATG3-204ENST00000467275 M0R2P5 195 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 YPEL1O60688 119 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 APOC1P02654 83 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 RBP4P02753 201 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 PYYP10082 97 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 SLC25A6P12236 298 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 CLLU1Q5K131 121 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 OR2T2Q6IF00 324 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 SNX29P2Q8IUI4 249 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 AIF1LQ9BQI0 150 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 LSM2Q9Y333 95 aaKnown RBP0.19□□□□□ -2.38
ATG3-204ENST00000467275 NOP16Q9Y3C1 178 aaKnown RBP0.19□□□□□ -2.38
ATG3-204ENST00000467275 AKAP11Q9UKA4 1901 aa0.19□□□□□ -2.38
ATG3-204ENST00000467275 UNC13AQ9UPW8 1703 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 CCDC171Q6TFL3 1326 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 ELOF1P60002 83 aaKnown RBP0.18□□□□□ -2.38
ATG3-204ENST00000467275 EMX2Q04743 252 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 NDUFA11Q86Y39 141 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 TMEM141Q96I45 108 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 BET1LQ9NYM9 111 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 F5P12259 2224 aa0.18□□□□□ -2.38
ATG3-204ENST00000467275 DOCK11Q5JSL3 2073 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 MYO7AQ13402 2215 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 TRAV12-2A0A075B6T6 113 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 DSCR8Q96T75 97 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 COA4Q9NYJ1 87 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 CACNA1HO95180 2353 aa0.17□□□□□ -2.38
ATG3-204ENST00000467275 TPRP12270 2363 aaKnown RBP0.17□□□□□ -2.38
ATG3-204ENST00000467275 SYNJ1O43426 1573 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 MCRIP1C9JLW8 97 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 J3QLW9 94 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 PPP1R1CQ8WVI7 109 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 PROK2Q9HC23 129 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 PTPRMP28827 1452 aa0.16□□□□□ -2.38
ATG3-204ENST00000467275 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
ATG3-204ENST00000467275 TRBV20-1A0A075B6N2 111 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 ZNF670-ZNF695F2Z2N8 137 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 NCS1P62166 190 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 HIST1H1AQ02539 215 aaPredicted RBP0.15□□□□□ -2.39
ATG3-204ENST00000467275 MMGT1Q8N4V1 131 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 IFI27L1Q96BM0 104 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 ERG28Q9UKR5 140 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 PHIPQ8WWQ0 1821 aa0.15□□□□□ -2.39
ATG3-204ENST00000467275 JMJD1CQ15652 2540 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 KDM6BO15054 1643 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 CCDC179H3BU77 68 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 ARPC5O15511 151 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 IGLC6P0CF74 106 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 CKS1BP61024 79 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 BATF3Q9NR55 127 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 PARP14Q460N5 1801 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
ATG3-204ENST00000467275 RBAKDNA6NC62 111 aa0.13□□□□□ -2.39
ATG3-204ENST00000467275 TSPAN19P0C672 248 aa0.13□□□□□ -2.39
ATG3-204ENST00000467275 NPC2P61916 151 aa0.13□□□□□ -2.39
ATG3-204ENST00000467275 SAR1AQ9NR31 198 aa0.13□□□□□ -2.39
ATG3-204ENST00000467275 ARHGEF10O15013 1369 aa0.13□□□□□ -2.39
ATG3-204ENST00000467275 ERCC6Q03468 1493 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms