RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 NDUFB6O95139 128 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 TCRBP04435 133 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 S100A9P06702 114 aaKnown RBP3.64□□□□□ -1.83
CXXC4-202ENST00000466963 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 RAB2BQ8WUD1 216 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 TMEM238LA0A1B0GVL6 79 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 IGHV3-30P01768 117 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 IGHV3-33P01772 117 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 IGHV3-30-3P0DP02 117 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 IGHV3-30-5P0DP03 117 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
CXXC4-202ENST00000466963 SMAGPQ0VAQ4 97 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 NEDD8Q15843 81 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 TOMM5Q8N4H5 51 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 GAS8-AS1O95177 125 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 TYMSP04818 313 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 TMBIM6P55061 237 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 SMUG1Q53HV7 270 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 SPANXN2Q5MJ10 180 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 TMEM75Q8N9X5 138 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 FUNDC2Q9BWH2 189 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 TNFRSF18Q9Y5U5 241 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 H7C1H1 209 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 ASIPP42127 132 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 IGFL4Q6B9Z1 124 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 UFSP1Q6NVU6 142 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 SUN5Q8TC36 379 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 DIRAS2Q96HU8 199 aa3.63□□□□□ -1.83
CXXC4-202ENST00000466963 TRBV7-3A0A075B6L6 115 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 LINC00854A0A1B0GVQ3 168 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 SSSCA1O60232 199 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 NOL3O60936 208 aaKnown RBP3.62□□□□□ -1.83
CXXC4-202ENST00000466963 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
CXXC4-202ENST00000466963 C5orf17Q8NAS9 161 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 MCFD2Q8NI22 146 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 ISOC2Q96AB3 205 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 FXYD5Q96DB9 178 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 FAM167A-AS1Q96KT0 104 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 FLVCR2Q9UPI3 526 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 ARL2-SNX15V9GYD0 113 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 PGPEP1LA6NFU8 196 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 NDUFS6O75380 124 aaKnown RBP3.62□□□□□ -1.83
CXXC4-202ENST00000466963 MBP02144 154 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 PRM2P04554 102 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 UBE2D3P61077 147 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 UBE2D2P62837 147 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 OR11H4Q8NGC9 324 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 SLC25A2Q9BXI2 301 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 C11orf1Q9H5F2 150 aa3.62□□□□□ -1.83
CXXC4-202ENST00000466963 TRBV6-8A0A0A6YYG3 113 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 METTL15P1P0C7V9 234 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 PET100P0DJ07 73 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 RNF151Q2KHN1 245 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 TREM1Q9NP99 234 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 TMEM167BQ9NRX6 74 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 MCUBQ9NWR8 336 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 H2AFB1P0C5Y9 115 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 H2AFB2P0C5Z0 115 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 ERCC8Q13216 396 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 PPP1R1AQ13522 171 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 PRNTQ86SH4 94 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 PGLYRP4Q96LB8 373 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 NPCDR1Q9BY65 106 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 ZFP30Q9Y2G7 519 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.61□□□□□ -1.83
CXXC4-202ENST00000466963 FABP5P3A8MUU1 101 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 NCR2O95944 276 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 FGF7P21781 194 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 UBE2WQ96B02 151 aa3.61□□□□□ -1.83
CXXC4-202ENST00000466963 TNXBP22105 4242 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 PRSS1P07477 247 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 CTF1Q16619 201 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 IQCJQ1A5X6 159 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 GSKIPQ9P0R6 139 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 ARL16Q0P5N6 197 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 KLK12Q9UKR0 248 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 KIF25-AS1Q9Y6Z4 181 aa3.6□□□□□ -1.83
CXXC4-202ENST00000466963 TRBV25-1A0A075B6N4 114 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 IGKV2-40A0A087WW87 121 aaPredicted RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 SCO2A0A1W2PP80 73 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 RGS5O15539 181 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 IGKV2D-40P01614 121 aaPredicted RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 SFTA3P0C7M3 94 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 S100A5P33763 92 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 BCAP31P51572 246 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 UBE2L3P68036 154 aaKnown RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 WFDC2Q14508 124 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 MIC13Q5XKP0 118 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 Q8N3U1 123 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 SAMD10Q9BYL1 202 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 FLG2Q5D862 2391 aaPredicted RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms