RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 OR10J4P0C629 311 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 ZNF688P0C7X2 276 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 STAG3L2P0CL84 134 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 HIST1H1EP10412 219 aaKnown RBP4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 PSMB3P49720 205 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 RAB5CP51148 216 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 CMC4P56277 68 aaPredicted RBP4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 SNRPD3P62318 126 aaKnown RBP4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 UBE2L3P68036 154 aaKnown RBP4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 PDE6HQ13956 83 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 ZNF726P1Q15940 193 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 GUK1Q16774 197 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 SSX7Q7RTT5 188 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 FXYD5Q96DB9 178 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 PHYHIPLQ96FC7 376 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 TMEM101Q96IK0 257 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 WFDC10AQ9H1F0 79 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 ZNF331Q9NQX6 463 aaPredicted RBP4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 ZNF586Q9NXT0 402 aa4.1□□□□□ -1.75
PRPF4B-204ENST00000466185 MAP1LC3B2A6NCE7 125 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 HMGB3O15347 200 aaKnown RBP4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 CXorf1O96002 111 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 NBEAP1P0C6P0 100 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 SULT1A2P50226 295 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 FGF8P55075 233 aaPredicted RBP4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 DEFB131AP59861 70 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 REG3AQ06141 175 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 PSMG4Q5JS54 123 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 ALKAL2Q6UX46 152 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 DEFB125Q8N687 156 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 SUN5Q8TC36 379 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 LRRC20Q8TCA0 184 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 BLNKQ8WV28 456 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 MAP1LC3BQ9GZQ8 125 aa4.09□□□□□ -1.75
PRPF4B-204ENST00000466185 HLA-DMBP28068 263 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 GCHFRP30047 84 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 PSG9Q00887 426 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 DEFA6Q01524 100 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 PSG3Q16557 428 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 FAM74A1Q5RGS3 127 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 LINC00322Q6ZN03 302 aaPredicted RBP4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 APRG1Q8IVJ8 170 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 C20orf203Q8NBC4 194 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 SFT2D1Q8WV19 159 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 MBD3L1Q8WWY6 194 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 TMEM167BQ9NRX6 74 aa4.08□□□□□ -1.76
PRPF4B-204ENST00000466185 SORL1Q92673 2214 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 TRAV1-1A0A0B4J248 108 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 A0A0J9YX75 114 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 KNCNA6PVL3 124 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 M0R3E3 92 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 NUTF2P61970 127 aaKnown RBP4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 RANP62826 216 aaKnown RBP4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 ACTL10Q5JWF8 245 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 GDF5OSQ5U4N7 250 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 TEX261Q6UWH6 196 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 IQCF2Q8IXL9 164 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 EXOC3-AS1Q8N2X6 119 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 ZNF738Q8NE65 137 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 SAV1Q9H4B6 383 aaPredicted RBP4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 TUBA4BQ9H853 241 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 PRELID1Q9Y255 219 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 HLA-DRB4X5D2U9 266 aa4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 PRKDCP78527 4128 aaKnown RBP4.07□□□□□ -1.76
PRPF4B-204ENST00000466185 LOC102724200A0A096LPH7 203 aaPredicted RBP4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 IGKV3D-20A0A0C4DH25 116 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 A0A1W2PRE2 83 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 A8MTW9 85 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 ZNF705FA8MVS1 300 aaPredicted RBP4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 GGTLC3B5MD39 225 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 H3BMM0 161 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 SIVA1O15304 175 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 HBE1P02100 147 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 DEFB1P60022 68 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 EBLN2Q6P2I7 272 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 ZNF767PQ75MW2 155 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 OR8A1Q8NGG7 326 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 OTORQ9NRC9 128 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 YTHDF2Q9Y5A9 579 aaKnown RBP4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 ARL2-SNX15V9GYD0 113 aa4.06□□□□□ -1.76
PRPF4B-204ENST00000466185 A0A1B0GV50 99 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 RBAKDNA6NC62 111 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 PGPA6NDG6 321 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 IFNA7P01567 189 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 CSN1S1P47710 185 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 UBE2G2P60604 165 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 HIST1H1AQ02539 215 aaPredicted RBP4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 AMTNQ6UX39 209 aa4.05□□□□□ -1.76
PRPF4B-204ENST00000466185 LINC00173Q6ZV60 143 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms