RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 TSPOP30536 169 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 DEFB1P60022 68 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 PSMG4Q5JS54 123 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 Q6ZQT7 251 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 Q8N8P6 123 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 OR2K2Q8NGT1 345 aa13.71□□□□□ -0.22
LETM1-202ENST00000466175 FAM159AQ6UWV7 190 aa13.7□□□□□ -0.22
LETM1-202ENST00000466175 SNHG12Q9BXW3 62 aa13.7□□□□□ -0.22
LETM1-202ENST00000466175 ANK3Q12955 4377 aaKnown RBP13.7□□□□□ -0.22
LETM1-202ENST00000466175 DPF1Q92782 380 aa13.69□□□□□ -0.22
LETM1-202ENST00000466175 DPH3P1Q9H4G8 78 aa13.69□□□□□ -0.22
LETM1-202ENST00000466175 ZMAT5Q9UDW3 170 aaKnown RBP13.69□□□□□ -0.22
LETM1-202ENST00000466175 CUBNO60494 3623 aa13.69□□□□□ -0.22
LETM1-202ENST00000466175 C7orf71A4D174 169 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 NXPH4O95158 308 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 IGLL1P15814 213 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 FCER1GP30273 86 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 RIPPLY3P57055 190 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 SCGB2A2Q13296 93 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 TIMM8BQ9Y5J9 83 aaPredicted RBP13.68□□□□□ -0.22
LETM1-202ENST00000466175 PPP1R17O96001 155 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 TFPI2P48307 235 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 Q6ZN92 141 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 FOXI2Q6ZQN5 318 aa13.68□□□□□ -0.22
LETM1-202ENST00000466175 EREGO14944 169 aa13.67□□□□□ -0.22
LETM1-202ENST00000466175 HNRNPA3P51991 378 aaKnown RBP13.67□□□□□ -0.22
LETM1-202ENST00000466175 NRACQ8N912 160 aa13.67□□□□□ -0.22
LETM1-202ENST00000466175 AP1S3Q96PC3 154 aa13.67□□□□□ -0.22
LETM1-202ENST00000466175 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
LETM1-202ENST00000466175 M0R381 172 aa13.66□□□□□ -0.22
LETM1-202ENST00000466175 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
LETM1-202ENST00000466175 MAJINQ3KP22 176 aa13.66□□□□□ -0.22
LETM1-202ENST00000466175 OR1N2Q8NGR9 330 aa13.66□□□□□ -0.22
LETM1-202ENST00000466175 IFI27L1Q96BM0 104 aa13.66□□□□□ -0.22
LETM1-202ENST00000466175 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
LETM1-202ENST00000466175 ATRQ13535 2644 aa13.65□□□□□ -0.22
LETM1-202ENST00000466175 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
LETM1-202ENST00000466175 Q6ZSV7 163 aa13.65□□□□□ -0.22
LETM1-202ENST00000466175 C20orf78Q9BR46 151 aa13.65□□□□□ -0.22
LETM1-202ENST00000466175 IGLV2-18A0A075B6J9 118 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 K7EMI3 77 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 GNRH2O43555 120 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 CDKN1BP46527 198 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 SLURP1P55000 103 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 GAS8-AS1O95177 125 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 POM121L12Q8N7R1 296 aa13.64□□□□□ -0.23
LETM1-202ENST00000466175 H0Y8G0 127 aa13.63□□□□□ -0.23
LETM1-202ENST00000466175 GATA1P15976 413 aaPredicted RBP13.63□□□□□ -0.23
LETM1-202ENST00000466175 LAGE3Q14657 143 aa13.63□□□□□ -0.23
LETM1-202ENST00000466175 ADAMTSL5Q6ZMM2 481 aa13.63□□□□□ -0.23
LETM1-202ENST00000466175 GOLT1BQ9Y3E0 138 aa13.63□□□□□ -0.23
LETM1-202ENST00000466175 TRAV12-3A0A0B4J271 114 aa13.62□□□□□ -0.23
LETM1-202ENST00000466175 A0A1B0GV90 55 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 ATP5LO75964 103 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 SMIM17P0DL12 118 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 KLHL30-AS1Q8NEE0 82 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 PMCHL2Q9BQD1 86 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 A8MTW9 85 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 CD7P09564 240 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 DEFB136Q30KP8 78 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 KHDC1LQ5JSQ8 128 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 C18orf65Q6ZTR6 163 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 C14orf178Q8N769 122 aaPredicted RBP13.61□□□□□ -0.23
LETM1-202ENST00000466175 SMIM2Q9BVW6 85 aa13.61□□□□□ -0.23
LETM1-202ENST00000466175 TRAV26-2A0A0B4J265 109 aa13.6□□□□□ -0.23
LETM1-202ENST00000466175 NUTF2P61970 127 aaKnown RBP13.6□□□□□ -0.23
LETM1-202ENST00000466175 SLC25A34Q6PIV7 304 aa13.6□□□□□ -0.23
LETM1-202ENST00000466175 SYT8Q8NBV8 401 aa13.6□□□□□ -0.23
LETM1-202ENST00000466175 IGHV1OR15-1A0A075B7D0 117 aa13.59□□□□□ -0.23
LETM1-202ENST00000466175 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
LETM1-202ENST00000466175 ORMDL2Q53FV1 153 aa13.59□□□□□ -0.23
LETM1-202ENST00000466175 DYNLRB2Q8TF09 96 aa13.59□□□□□ -0.23
LETM1-202ENST00000466175 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
LETM1-202ENST00000466175 C9orf85Q96MD7 179 aa13.59□□□□□ -0.23
LETM1-202ENST00000466175 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.24
LETM1-202ENST00000466175 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
LETM1-202ENST00000466175 RPL32P62910 135 aaKnown RBP13.58□□□□□ -0.24
LETM1-202ENST00000466175 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
LETM1-202ENST00000466175 RASL10AQ92737 203 aa13.58□□□□□ -0.24
LETM1-202ENST00000466175 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
LETM1-202ENST00000466175 TRGV11A0A075B6L2 103 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 TRAV25A0A0B4J276 109 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 MGPP08493 103 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 HLA-DRB4P13762 266 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 FXYD7P58549 80 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 COL5A1-AS1Q5SY13 56 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 DLX4Q92988 240 aaPredicted RBP13.57□□□□□ -0.24
LETM1-202ENST00000466175 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 HLA-DRB4X5D2U9 266 aa13.57□□□□□ -0.24
LETM1-202ENST00000466175 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms