RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PRM2P04554 102 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 KRTAP1-4P0C5Y4 121 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 LMO2P25791 158 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 UBE2AP49459 152 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 FAM104BQ5XKR9 115 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 C16orf47Q6ZP98 133 aaPredicted RBP2.31□□□□□ -2.04
SNX4-202ENST00000465505 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 ABCA7Q8IZY2 2146 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 TMEM252Q8N6L7 170 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 CD177Q8N6Q3 437 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 WFDC5Q8TCV5 224 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 Q9H3A6 140 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 ABRACLQ9P1F3 81 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 KIAA1549LQ6ZVL6 1849 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 IGHV1-45A0A0A0MS14 117 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 A0A1W2PQD3 144 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 ZNF736B4DX44 427 aaPredicted RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 K7EQG2 157 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 LY6G6DO95868 133 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 SLC25A16P16260 332 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 IGHV1-2P23083 117 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 KLKP1Q107X0 134 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 INSL4Q14641 139 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 NOXRED1Q6NXP6 359 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 CEMP1Q6PRD7 247 aaPredicted RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 IGFL3Q6UXB1 125 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 LINC00173Q6ZV60 143 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 BAGE3Q86Y29 109 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 BAGE2Q86Y30 109 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 ZNF584Q8IVC4 421 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 CLDND2Q8NHS1 167 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 ITLN1Q8WWA0 313 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 NXT2Q9NPJ8 142 aaKnown RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 CMC2Q9NRP2 79 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 TAS2R4Q9NYW5 299 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 MRPL35Q9NZE8 188 aaKnown RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 IL36BQ9NZH7 164 aa2.3□□□□□ -2.04
SNX4-202ENST00000465505 PRRC2AP48634 2157 aaKnown RBP2.3□□□□□ -2.04
SNX4-202ENST00000465505 MYO7BQ6PIF6 2116 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 C4AP0C0L4 1744 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 C4BP0C0L5 1744 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 LMO7Q8WWI1 1683 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 LRRC37A3O60309 1634 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 NHSL1Q5SYE7 1610 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 THSD7BQ9C0I4 1608 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 IGLV3-9A0A075B6K5 115 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 IGHV3OR15-7A0A075B7D8 119 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 A0A1W2PPR1 153 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 C19orf71A6NCJ1 209 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 C3orf84H3BNL1 204 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 K7EQD1 137 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 SOCS3O14543 225 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 HCRTO43612 131 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 IGKV1-16P04430 117 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 CD28P10747 220 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 MDKP21741 143 aaPredicted RBP2.29□□□□□ -2.04
SNX4-202ENST00000465505 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
SNX4-202ENST00000465505 PCBD1P61457 104 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 BLCAPP62952 87 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 SLC48A1Q6P1K1 146 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 LYPD5Q6UWN5 251 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 CXCL17Q6UXB2 119 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 NPCDR1Q9BY65 106 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 EPDR1Q9UM22 224 aa2.29□□□□□ -2.04
SNX4-202ENST00000465505 ZNF706Q9Y5V0 76 aaPredicted RBP2.29□□□□□ -2.04
SNX4-202ENST00000465505 RICTORQ6R327 1708 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 MED13Q9UHV7 2174 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 IGKV1D-17A0A075B6S4 117 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 IGKV6D-21A0A0A0MT36 114 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 TRAV13-2A0A0B4J235 113 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 NPYP01303 97 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 SAA1P0DJI8 122 aaPredicted RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 GCHFRP30047 84 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 FXYD2P54710 66 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 HERVK_113P61574 105 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 SNRPGP62308 76 aaKnown RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 RPL30P62888 115 aaKnown RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 RPL18Q07020 188 aaKnown RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 RHOHQ15669 191 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 Q6ZR54 194 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 Q6ZRP5 223 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 SPTSSAQ969W0 71 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 ZNF714Q96N38 554 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 XAGE1AQ9HD64 81 aa2.28□□□□□ -2.04
SNX4-202ENST00000465505 COL11A1P12107 1806 aaPredicted RBP2.28□□□□□ -2.04
SNX4-202ENST00000465505 DOT1LQ8TEK3 1739 aa2.28□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3OR16-10A0A075B7F0 116 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 IGHV7-81A0A0B4J1V7 117 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 TRAV3A0A0B4J244 114 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-38A0A0C4DH36 116 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 IGKV1-12A0A0C4DH73 117 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 KRTAP4-16G5E9R7 235 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms