RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 AKR1D1P51857 326 aa-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 ELOF1P60002 83 aaKnown RBP-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 RPS28P62857 69 aaKnown RBP-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 Q5BKY6 102 aa-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 SKA2Q8WVK7 121 aaPredicted RBP-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 DNAJC15Q9Y5T4 150 aa-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 TSTD3H0UI37 97 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 APOC1P02654 83 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 PPDPFLQ8WWR9 84 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 BANF2Q9H503 90 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 COA4Q9NYJ1 87 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 GINS2Q9Y248 185 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 NCOR2Q9Y618 2525 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 ANK2Q01484 3957 aa-0.1□□□□□ -2.43
PTPN12-210ENST00000464313 TRAV36DV7A0A075B6V5 113 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 A0A1B0GW64 132 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 EMX2Q04743 252 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 OR8B8Q15620 311 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 PRR15LQ9BU68 103 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 MAP2P11137 1827 aaKnown RBP-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 COL7A1Q02388 2944 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 MED13LQ71F56 2210 aa-0.11□□□□□ -2.43
PTPN12-210ENST00000464313 IGSF10Q6WRI0 2623 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 ZNF670-ZNF695F2Z2N8 137 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 TNFSF15O95150 251 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 SLC25A6P12236 298 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 HLA-DRB4P13762 266 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 BET1LQ9NYM9 111 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 TAS2R8Q9NYW2 309 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 HLA-DRB4X5D2U9 266 aa-0.12□□□□□ -2.43
PTPN12-210ENST00000464313 CASZ1Q86V15 1759 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 KDM5CP41229 1560 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 TRAV12-2A0A075B6T6 113 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 F2Z2F3 143 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 H0YJX3 145 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 SMIM24O75264 130 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 OR2T2Q6IF00 324 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 SNX29P2Q8IUI4 249 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 HSPB11Q9Y547 144 aa-0.13□□□□□ -2.43
PTPN12-210ENST00000464313 DMBT1Q9UGM3 2413 aaPredicted RBP-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 DEGS1O15121 323 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 CMPK1P30085 196 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 DYNLRB2Q8TF09 96 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 PPP1R1CQ8WVI7 109 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 VPS25Q9BRG1 176 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 HIGD1AQ9Y241 93 aa-0.14□□□□□ -2.43
PTPN12-210ENST00000464313 TNS1Q9HBL0 1735 aaKnown RBP-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 A0A1B0GX51 115 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 GNG14A0A1W2PPG7 69 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 TCRBV3S1A0A5B6 114 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 MCRIP1C9JLW8 97 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 NBEAP1P0C6P0 100 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 CLLU1Q5K131 121 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 IFI27L1Q96BM0 104 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 NOP16Q9Y3C1 178 aaKnown RBP-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 SOGA1O94964 1423 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 POLQO75417 2590 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 F5P12259 2224 aa-0.15□□□□□ -2.43
PTPN12-210ENST00000464313 CELSR1Q9NYQ6 3014 aa-0.16□□□□□ -2.43
PTPN12-210ENST00000464313 PLXNA2O75051 1894 aa-0.16□□□□□ -2.43
PTPN12-210ENST00000464313 SCTP09683 121 aa-0.16□□□□□ -2.44
PTPN12-210ENST00000464313 TCTE3Q8IZS6 198 aa-0.16□□□□□ -2.44
PTPN12-210ENST00000464313 CCDC171Q6TFL3 1326 aa-0.16□□□□□ -2.44
PTPN12-210ENST00000464313 MYO7AQ13402 2215 aa-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 GVQW2A0A096LPI5 108 aaPredicted RBP-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 TRAV2A0A0B4J234 112 aa-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 ATP6V0E2Q8NHE4 81 aa-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 BPESC1Q9GZL8 116 aa-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 CELSR2Q9HCU4 2923 aa-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 MRPL40Q9NQ50 206 aaKnown RBP-0.17□□□□□ -2.44
PTPN12-210ENST00000464313 RBP4P02753 201 aa-0.18□□□□□ -2.44
PTPN12-210ENST00000464313 COX6A2Q02221 97 aa-0.18□□□□□ -2.44
PTPN12-210ENST00000464313 CYP2G1PQ6ZSU1 146 aa-0.18□□□□□ -2.44
PTPN12-210ENST00000464313 KIF13AQ9H1H9 1805 aa-0.18□□□□□ -2.44
PTPN12-210ENST00000464313 VIRMAQ69YN4 1812 aaKnown RBP-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 A0A087WTM6 91 aa-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 NPC2P61916 151 aa-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 LSM2Q9Y333 95 aaKnown RBP-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 F8P00451 2351 aa-0.19□□□□□ -2.44
PTPN12-210ENST00000464313 PTPRMP28827 1452 aa-0.2□□□□□ -2.44
PTPN12-210ENST00000464313 BORCS7-ASMTA0A0B4J1R7 106 aa-0.2□□□□□ -2.44
PTPN12-210ENST00000464313 RBAKDNA6NC62 111 aa-0.2□□□□□ -2.44
PTPN12-210ENST00000464313 ATP11AUNQ6ZP68 121 aa-0.2□□□□□ -2.44
PTPN12-210ENST00000464313 FAM213BQ8TBF2 198 aa-0.2□□□□□ -2.44
PTPN12-210ENST00000464313 CACNA1CQ13936 2221 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 CDK13Q14004 1512 aaKnown RBP-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 NMBP08949 121 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 COX4I1P13073 169 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 CCL3L1P16619 93 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 SMIM11BQ8TCY0 68 aa-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 MAGOHBQ96A72 148 aaKnown RBP-0.21□□□□□ -2.44
PTPN12-210ENST00000464313 ARAP1Q96P48 1450 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 SYNJ1O43426 1573 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 UNC79Q9P2D8 2635 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 J3QLW9 94 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 B2MP61769 119 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 CCDC153Q494R4 210 aa-0.22□□□□□ -2.44
PTPN12-210ENST00000464313 NDUFA11Q86Y39 141 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms