RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TMEM30CPA0ZSE6 113 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 SPRR2EP22531 72 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 SPRR2BP35325 72 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 MAXP61244 160 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 GNG3P63215 75 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 RPL19P84098 196 aaKnown RBP-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 Q5XG85 94 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 CARD19Q96LW7 228 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 C19orf12Q9NSK7 152 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 MPC1Q9Y5U8 109 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 NUBP2Q9Y5Y2 271 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 TLN2Q9Y4G6 2542 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 PRUNE2Q8WUY3 3088 aa-0.41□□□□□ -2.48
SCARNA18-201ENST00000459004 VCANP13611 3396 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 SMG1Q96Q15 3661 aaKnown RBP-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 PCNX1Q96RV3 2341 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 TRDV1A0A1B0GX56 115 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 OR8J3Q8NGG0 315 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 PRELID3AQ96N28 172 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 COMMD3Q9UBI1 195 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 HTTP42858 3142 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 BLMP54132 1417 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 SZT2Q5T011 3432 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 UNC13BO14795 1591 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 C5orf42Q9H799 3197 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 DCHS2Q6V1P9 2916 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 MYO9AB2RTY4 2548 aa-0.42□□□□□ -2.48
SCARNA18-201ENST00000459004 RELNP78509 3460 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 EIF3AQ14152 1382 aaKnown RBP-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 UTP20O75691 2785 aaKnown RBP-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 LOC107986453A0A1B0GWG9 222 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 TPST1O60507 370 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 E2F6O75461 281 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 MPC1LP0DKB6 136 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 GLRXP35754 106 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 TCTAP57738 103 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 TMED4Q7Z7H5 227 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 SMIM20Q8N5G0 67 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 FAM213BQ8TBF2 198 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 DMAC1Q96GE9 116 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 MED11Q9P086 117 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 ABCA4P78363 2273 aa-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.43□□□□□ -2.48
SCARNA18-201ENST00000459004 CEP350Q5VT06 3117 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 DLEC1Q9Y238 1755 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 YTHDC2Q9H6S0 1430 aaKnown RBP-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 LRRK2Q5S007 2527 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 TLN1Q9Y490 2541 aaKnown RBP-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 CENPEQ02224 2701 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 IFITM5A6NNB3 132 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 MCRIP1C9JLW8 97 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 GABARAPH6UMI1 98 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 BCL2P10415 239 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 SDC2P34741 201 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 ETV6P41212 452 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 KRTAP6-2Q3LI66 62 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 LYPD5Q6UWN5 251 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 FAM24BQ8N5W8 94 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 BIN3Q9NQY0 253 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 STOML2Q9UJZ1 356 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 FRYLO94915 3013 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 APC2O95996 2303 aa-0.44□□□□□ -2.48
SCARNA18-201ENST00000459004 CACNA1CQ13936 2221 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 NUP210Q8TEM1 1887 aaPredicted RBP-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 EDF1O60869 148 aaKnown RBP-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 TAS2R41P59536 307 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 CRYBG3Q68DQ2 2970 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 DSCR8Q96T75 97 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 PRR15LQ9BU68 103 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 FKBP11Q9NYL4 201 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 LAMC3Q9Y6N6 1575 aa-0.45□□□□□ -2.48
SCARNA18-201ENST00000459004 REV3LO60673 3130 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 GVINP1Q7Z2Y8 2422 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 TNS1Q9HBL0 1735 aaKnown RBP-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 A0A0G2JMM0 328 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 TRBV27A0A0K0K1C4 114 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 TMEM189A5PLL7 270 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 H7BYZ3 331 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 IGKCP01834 107 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 MT1BP07438 61 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 IL7P13232 177 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 GTF2A1P52655 376 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 RHOHQ15669 191 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 STX19Q8N4C7 294 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 DYDC1Q8WWB3 177 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 AP3S1Q92572 193 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 UFC1Q9Y3C8 167 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 CPDO75976 1380 aa-0.46□□□□□ -2.48
SCARNA18-201ENST00000459004 CFAP47Q6ZTR5 3102 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 SOGA1O94964 1423 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 FAM135BQ49AJ0 1406 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 RANBP2P49792 3224 aaKnown RBP-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 FAM186AA6NE01 2351 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 MKI67P46013 3256 aaKnown RBP-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 SYNMO15061 1565 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 CDC42EP2O14613 210 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 MT1HL1P0DM35 61 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 COX6A2Q02221 97 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms