RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TMEM256Q8N2U0 113 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 WFDC5Q8TCV5 224 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 DIRC1Q969H9 104 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 OR8B2Q96RD0 313 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 TRGV9Q99603 122 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 NXT2Q9NPJ8 142 aaKnown RBP3.96□□□□□ -1.78
VPS41-209ENST00000457055 SCRT2Q9NQ03 307 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 TRAPPC1Q9Y5R8 145 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 SCN8AQ9UQD0 1980 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 POLEQ07864 2286 aa3.96□□□□□ -1.78
VPS41-209ENST00000457055 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.78
VPS41-209ENST00000457055 RAI1Q7Z5J4 1906 aaPredicted RBP3.95□□□□□ -1.78
VPS41-209ENST00000457055 HEATR5AQ86XA9 2040 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 NBASA2RRP1 2371 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 IGHV1OR15-1A0A075B7D0 117 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 IGHV1-45A0A0A0MS14 117 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 TRAV17A0A0B4J275 112 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 PRSS1P07477 247 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 ASAH2BP0C7U1 165 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 IGHV3-43DP0DP04 118 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 COX8AP10176 69 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 FUSP35637 526 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS41-209ENST00000457055 HERVK_113P61574 105 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 RPL30P62888 115 aaKnown RBP3.95□□□□□ -1.78
VPS41-209ENST00000457055 REG3AQ06141 175 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 CIRBPQ14011 172 aaKnown RBP3.95□□□□□ -1.78
VPS41-209ENST00000457055 SS18Q15532 418 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 RPL7L1Q6DKI1 246 aaKnown RBP3.95□□□□□ -1.78
VPS41-209ENST00000457055 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 FAM72BQ86X60 149 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 BAGE3Q86Y29 109 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 BAGE2Q86Y30 109 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 LINC01555Q8NAE3 123 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 SCRT1Q9BWW7 348 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 Q9H3A6 140 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 TAS2R4Q9NYW5 299 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 LY96Q9Y6Y9 160 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 KIAA1549LQ6ZVL6 1849 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 CRYBG3Q68DQ2 2970 aa3.95□□□□□ -1.78
VPS41-209ENST00000457055 SPTBN1Q01082 2364 aaKnown RBP3.95□□□□□ -1.78
VPS41-209ENST00000457055 FBN3Q75N90 2809 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 CENPEQ02224 2701 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 PCNX1Q96RV3 2341 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 TRAV14DV4A0A0A6YYC5 116 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 TRGV8A0A0C4DH27 118 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 IGHV3-20A0A0C4DH32 117 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 A0A1B0GW54 56 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 SERF1AO75920 110 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 C1QAP02745 245 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 ACYP1P07311 99 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 PRSS2P07478 247 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 BLCAPP62952 87 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 LAIR2Q6ISS4 152 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 CD177Q8N6Q3 437 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 CYB561D1Q8N8Q1 229 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 C11orf52Q96A22 123 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 TAC3Q9UHF0 121 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 MYOFQ9NZM1 2061 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 PCDH15Q96QU1 1955 aa3.94□□□□□ -1.78
VPS41-209ENST00000457055 ZFC3H1O60293 1989 aaKnown RBP3.93□□□□□ -1.78
VPS41-209ENST00000457055 PIGBOS1A0A0B4J2F0 54 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 LOC285095A0A1B0GVY8 99 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 CCL16O15467 120 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 IGHV4-38-2P0DP08 117 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 CKS2P33552 79 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 RNASE4P34096 147 aaKnown RBP3.93□□□□□ -1.78
VPS41-209ENST00000457055 CYCSP99999 105 aaKnown RBP3.93□□□□□ -1.78
VPS41-209ENST00000457055 INSL4Q14641 139 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 ZNF791Q3KP31 576 aaPredicted RBP3.93□□□□□ -1.78
VPS41-209ENST00000457055 TMEM61Q8N0U2 210 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.93□□□□□ -1.78
VPS41-209ENST00000457055 Q8N8P6 123 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 AQP3Q92482 292 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 UPK3BQ9BT76 320 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 OSTCQ9NRP0 149 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 F8P00451 2351 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 RTTNQ86VV8 2226 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
VPS41-209ENST00000457055 ANAPC1Q9H1A4 1944 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 IGLV3-10A0A075B6K4 115 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 TRBV6-7A0A0A0MS04 114 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 K7EQD1 137 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 PEX7O00628 323 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 ZNF816Q0VGE8 651 aaPredicted RBP3.92□□□□□ -1.78
VPS41-209ENST00000457055 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 DEFB119Q8N690 84 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 RMI2Q96E14 147 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 ODF3Q96PU9 254 aa3.92□□□□□ -1.78
VPS41-209ENST00000457055 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
VPS41-209ENST00000457055 LRRK2Q5S007 2527 aa3.91□□□□□ -1.78
VPS41-209ENST00000457055 F2Z2F3 143 aa3.91□□□□□ -1.78
VPS41-209ENST00000457055 C19orf84I3L1E1 186 aa3.91□□□□□ -1.78
VPS41-209ENST00000457055 IGLV2-8P01709 118 aa3.91□□□□□ -1.78
VPS41-209ENST00000457055 CXCL8P10145 99 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms