RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CMYA5Q8N3K9 4069 aa9.08□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SPANXN1Q5VSR9 72 aa9.08□□□□□ -0.96
HLA-DPA1-244ENST00000453337 RNF183Q96D59 192 aa9.08□□□□□ -0.96
HLA-DPA1-244ENST00000453337 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
HLA-DPA1-244ENST00000453337 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
HLA-DPA1-244ENST00000453337 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 K7EIL1 84 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 PRM2P04554 102 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 AZU1P20160 251 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 NTF3P20783 257 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 HBBP68871 147 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TWIST1Q15672 202 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MRPL54Q6P161 138 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 C16orf74Q96GX8 76 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
HLA-DPA1-244ENST00000453337 NBEAL1Q6ZS30 2694 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SNURFLB1AK76 121 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 M0R2P5 195 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SPRY2O43597 315 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 RAB5AP20339 215 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SSTP61278 116 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SMIM15Q7Z3B0 74 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 ZFP82Q8N141 532 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 PTH2Q96A98 100 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MUC21A0A0G2JKD1 596 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MUC21A0A140T8X8 626 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 A0A1B0GXF2 115 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 M0R381 172 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 CAMPP49913 170 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 GNB1LQ9BYB4 327 aa9.05□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MT-ND6P03923 174 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MIFP14174 115 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 RPS10P46783 165 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 RAB4BP61018 213 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 X6R8D5 127 aa9.04□□□□□ -0.96
HLA-DPA1-244ENST00000453337 NXPH4O95158 308 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 LGALS9BQ3B8N2 356 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
HLA-DPA1-244ENST00000453337 TMEM136Q6ZRR5 245 aa9.02□□□□□ -0.97
HLA-DPA1-244ENST00000453337 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
HLA-DPA1-244ENST00000453337 MRAPQ8TCY5 172 aa9.02□□□□□ -0.97
HLA-DPA1-244ENST00000453337 RASL10AQ92737 203 aa9.02□□□□□ -0.97
HLA-DPA1-244ENST00000453337 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
HLA-DPA1-244ENST00000453337 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 SBSPONQ8IVN8 264 aa9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 FRZBQ92765 325 aa9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 NOP10Q9NPE3 64 aaKnown RBP9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
HLA-DPA1-244ENST00000453337 TRGV1A0A0A0MS02 117 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 A8MWV9 139 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 APCSP02743 223 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 EVI2AP22794 236 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 SPATA25Q9BR10 227 aa9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
HLA-DPA1-244ENST00000453337 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 LYRM9A8MSI8 78 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 TRGC2P03986 189 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 EMP1P54849 157 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 FAM104BQ5XKR9 115 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 C14orf178Q8N769 122 aaPredicted RBP8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 DPH3P1Q9H4G8 78 aa8.99□□□□□ -0.97
HLA-DPA1-244ENST00000453337 CIDEAO60543 219 aa8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 Q8NAQ8 132 aa8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 TM2D3Q9BRN9 247 aa8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 ZMAT4Q9H898 229 aa8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
HLA-DPA1-244ENST00000453337 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 RS1O15537 224 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 CRYGDP07320 174 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 RAB4AP20338 218 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 Q6ZTI0 123 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 AMN1Q8IY45 258 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 JPT2Q9H910 190 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms