RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, human

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMS1-217	ENST00000450931	KCNIP4	Q6PIL6	250 aa		4.26	□□□□□ -1.73
PMS1-217	ENST00000450931		Q8N3U1	123 aa		4.26	□□□□□ -1.73
PMS1-217	ENST00000450931		A0A0D9SG52	128 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	GAGE12J	A6NER3	117 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	PGPEP1L	A6NFU8	196 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	PKIA	P61925	76 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	GAGE1	Q13065	139 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	GAGE4	Q13068	117 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	GAGE5	Q13069	117 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	GAGE13	Q4V321	117 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	OR5C1	Q8NGR4	320 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931		F6UZH7	168 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	PQLC2	Q6ZP29	291 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	C9orf163	Q8N9P6	203 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	OR10G7	Q8NGN6	311 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	TVP23C	Q96ET8	276 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	C1orf43	Q9BWL3	253 aa		4.25	□□□□□ -1.73
PMS1-217	ENST00000450931	IGHV3-73	A0A0B4J1V6	119 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	PGP	A6NDG6	321 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	RNASE3	P12724	160 aa	Known RBP	4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	CIRBP	Q14011	172 aa	Known RBP	4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	UFSP1	Q6NVU6	142 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	GOLT1A	Q6ZVE7	132 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	THAP6	Q8TBB0	222 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	RNF185	Q96GF1	192 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	NMES1	Q9C002	83 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	OR5AC2	Q9NZP5	309 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	KLK12	Q9UKR0	248 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931		A0A087WX48	190 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	ZFP69	Q49AA0	526 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	UBE2W	Q96B02	151 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	RBM38	Q9H0Z9	239 aa	Known RBP	4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	MBD2	Q9UBB5	411 aa		4.24	□□□□□ -1.73
PMS1-217	ENST00000450931	TNXB	P22105	4242 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	TRBV10-1	A0A0K0K1A3	114 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931		K7EQM0	130 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	IL7	P13232	177 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	NHLH2	Q02577	135 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	DMRTA1	Q5VZB9	504 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	CRP	P02741	224 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	TCRB	P04435	133 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	SMUG1	Q53HV7	270 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	DNLZ	Q5SXM8	178 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	ZC2HC1A	Q96GY0	325 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	HYLS1	Q96M11	299 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	SDHC	Q99643	169 aa	Predicted RBP	4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	C11orf21	Q9P2W6	132 aa		4.23	□□□□□ -1.73
PMS1-217	ENST00000450931	MIA	Q16674	131 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	C5orf17	Q8NAS9	161 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	USP17L23	D6RBM5	183 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	LYRM1	O43325	122 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	GCG	P01275	180 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	ZNF80	P51504	273 aa	Predicted RBP	4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	SAPCD1	Q5SSQ6	148 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	TMEM75	Q8N9X5	138 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	CLRN3	Q8NCR9	226 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	SEC22C	Q9BRL7	303 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	SAMD10	Q9BYL1	202 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	IL36B	Q9NZH7	164 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	TCRA	P04437	139 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	ASIP	P42127	132 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	C14orf178	Q8N769	122 aa	Predicted RBP	4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	PSG8	Q9UQ74	426 aa		4.22	□□□□□ -1.73
PMS1-217	ENST00000450931	PRSS1	P07477	247 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	S100A4	P26447	101 aa	Known RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	CNBP	P62633	177 aa	Known RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	RPL36A	P83881	106 aa	Known RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	CYCS	P99999	105 aa	Known RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	ENHO	Q6UWT2	76 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	OR10G8	Q8NGN5	311 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	SUN5	Q8TC36	379 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	RPL36AL	Q969Q0	106 aa	Known RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	DNAJC30	Q96LL9	226 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	LINC01600	Q96MT4	127 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	NUDT15	Q9NV35	164 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	PLA2G10	O15496	165 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	H2AFB2	P0C5Z0	115 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	UBE2D3	P61077	147 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	UBE2D2	P62837	147 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	FLI1	Q01543	452 aa	Predicted RBP	4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	TMEM97	Q5BJF2	176 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	SDIM1	Q6ZPB5	146 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	OR2T35	Q8NGX2	323 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	OR2G3	Q8NGZ4	309 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	SCGB1C1	Q8TD33	95 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	DPH3P1	Q9H4G8	78 aa		4.21	□□□□□ -1.74
PMS1-217	ENST00000450931	RNF213	Q63HN8	5207 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	TRAV6	A0A075B6T7	132 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931		A0A1W2PPV4	95 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	GNG5	P63218	68 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	SFRP2	Q96HF1	295 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	HSPB11	Q9Y547	144 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	TRBV6-8	A0A0A6YYG3	113 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	IGKV3D-20	A0A0C4DH25	116 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	OR11H4	Q8NGC9	324 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	PRR34	Q9NV39	138 aa		4.2	□□□□□ -1.74
PMS1-217	ENST00000450931	TRBV7-3	A0A075B6L6	115 aa		4.19	□□□□□ -1.74
PMS1-217	ENST00000450931	FABP5P3	A8MUU1	101 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms