RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 KCNS1Q96KK3 526 aa4.74□□□□□ -1.65
LINC01961-201ENST00000449954 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
LINC01961-201ENST00000449954 TIMM9Q9Y5J7 89 aa4.74□□□□□ -1.65
LINC01961-201ENST00000449954 DUXBA0A1W2PPF3 345 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 RBAKDNA6NC62 111 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 FAM25EA8MYX2 175 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 H3BP45 60 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 GNRH2O43555 120 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 NDUFB4O95168 129 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 TYMSP04818 313 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 CFC1BP0CG36 223 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 CRYGAP11844 174 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 SLC25A6P12236 298 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 UBE2D1P51668 147 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 MPV17L2Q567V2 206 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 EXOC3-AS1Q8N2X6 119 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 RAB2BQ8WUD1 216 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 PTH2Q96A98 100 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 BLOC1S6Q9UL45 172 aa4.73□□□□□ -1.65
LINC01961-201ENST00000449954 ANXA3P12429 323 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 RPS10P46783 165 aaKnown RBP4.72□□□□□ -1.65
LINC01961-201ENST00000449954 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 C12orf45Q8N5I9 185 aaPredicted RBP4.72□□□□□ -1.65
LINC01961-201ENST00000449954 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
LINC01961-201ENST00000449954 OR2G3Q8NGZ4 309 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 SAMD10Q9BYL1 202 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 TMEM14CQ9P0S9 112 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 MGAT4CQ9UBM8 478 aa4.72□□□□□ -1.65
LINC01961-201ENST00000449954 A0A096LNI7 61 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 TRAV21A0A0B4J279 112 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 A8MWV9 139 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 RAB3DO95716 219 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 GZMBP10144 247 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 CAV2P51636 162 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 TAS2R19P59542 299 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 Q6ZRG5 221 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 OR1L4Q8NGR5 311 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 PFDN5Q99471 154 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 PARLQ9H300 379 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 GPR132Q9UNW8 380 aa4.71□□□□□ -1.66
LINC01961-201ENST00000449954 TRBV6-8A0A0A6YYG3 113 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 LOC100506127A0A0U1RQW1 187 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 H0Y9J4 135 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 APOA1P02647 267 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 MT-ND6P03923 174 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 RRAS2P62070 204 aaPredicted RBP4.7□□□□□ -1.66
LINC01961-201ENST00000449954 PIK3CD-AS1Q5SR53 167 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 TMEM229BQ8NBD8 167 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 OR2T35Q8NGX2 323 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 GPN1Q9HCN4 374 aaPredicted RBP4.7□□□□□ -1.66
LINC01961-201ENST00000449954 CCDC59Q9P031 241 aaKnown RBP4.7□□□□□ -1.66
LINC01961-201ENST00000449954 MTFP1Q9UDX5 166 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 Q9UF83 564 aa4.7□□□□□ -1.66
LINC01961-201ENST00000449954 A0A087WWL8 130 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 P01737 135 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 CSN1S1P47710 185 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 FAM162BQ5T6X4 162 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 CLPSL2Q6UWE3 100 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 LINC00269Q8N2A0 174 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 C14orf178Q8N769 122 aaPredicted RBP4.69□□□□□ -1.66
LINC01961-201ENST00000449954 DYNC2LI1Q8TCX1 351 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 TMED6Q8WW62 240 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 C9orf85Q96MD7 179 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 SOSTQ9BQB4 213 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 MIXL1Q9H2W2 232 aa4.69□□□□□ -1.66
LINC01961-201ENST00000449954 RABL2AQ9UBK7 228 aaPredicted RBP4.69□□□□□ -1.66
LINC01961-201ENST00000449954 TRAV6A0A075B6T7 132 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 DISC1C4P0D8 188 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 RHODO00212 210 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 RPL36AP83881 106 aaKnown RBP4.68□□□□□ -1.66
LINC01961-201ENST00000449954 IZUMO2Q6UXV1 221 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 SUN5Q8TC36 379 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 MGST2Q99735 147 aa4.68□□□□□ -1.66
LINC01961-201ENST00000449954 TRBV10-1A0A0K0K1A3 114 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 TSPAN13O95857 204 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 PYYP10082 97 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 C1orf137Q5JT78 98 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 UFSP1Q6NVU6 142 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 SCGB3A2Q96PL1 93 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 PRRT1Q99946 306 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 CHCHD5Q9BSY4 110 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 GGACTQ9BVM4 153 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 PSENENQ9NZ42 101 aa4.67□□□□□ -1.66
LINC01961-201ENST00000449954 TRBV7-3A0A075B6L6 115 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 FAM24AA6NFZ4 105 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 PTTG1O95997 202 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 METTL15P1P0C7V9 234 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 CAMLGP49069 296 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 GABARAPL2P60520 117 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 S100A10P60903 97 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 UBE2D3P61077 147 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 UBE2D2P62837 147 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms