RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 U3KQE9 123 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 I3L2K1 104 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 K7EIM0 57 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 APOC4P55056 127 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 A0A0J9YXV3 536 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 NBL1P41271 181 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 WFDC2Q14508 124 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 hADV29S1A0JD25 119 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 H0YGX0 51 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 ACACBO00763 2458 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 XCL1P47992 114 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 FAM167A-AS1Q96KT0 104 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 SPRY2O43597 315 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 ZFP2Q6ZN57 461 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 PLXND1Q9Y4D7 1925 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 CLPSL2Q6UWE3 100 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 RMI2Q96E14 147 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 A0A096LPF7 62 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 LHBP01229 141 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 SP5Q6BEB4 398 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-204ENST00000448183 GTSF1Q8WW33 167 aa6.07□□□□□ -1.44
NEDD9-204ENST00000448183 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 C3orf56Q8N813 242 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 RNF138Q8WVD3 245 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 TTTY13Q9BZ97 58 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 ICOSQ9Y6W8 199 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 IGLV11-55A0A075B6I3 123 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 CENPVL3A0A0U1RRI6 287 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 NOP10Q9NPE3 64 aaKnown RBP6.06□□□□□ -1.44
NEDD9-204ENST00000448183 TRAV4A0A0B4J268 109 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 ATOX1O00244 68 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 KRTAP27-1Q3LI81 207 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 BDP1A6H8Y1 2624 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 CTSGP08311 255 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 HOXB4P17483 251 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-204ENST00000448183 SND1-IT1Q9HBX3 110 aa6.06□□□□□ -1.44
NEDD9-204ENST00000448183 NLRC5Q86WI3 1866 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 IGHV7-81A0A0B4J1V7 117 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 A0A0B4J2C4 111 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 BUB3O43684 328 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 NPBQ8NG41 125 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 PLXNA2O75051 1894 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 KMT2EQ8IZD2 1858 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 FOXI1Q12951 378 aa6.05□□□□□ -1.44
NEDD9-204ENST00000448183 E9PLD3 99 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 RNF152Q8N8N0 203 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 Q96MF0 132 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 TANC1Q9C0D5 1861 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 PRSS33Q8NF86 280 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 A0A1B0GX51 115 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 FUSP35637 526 aaKnown RBP eCLIP6.04□□□□□ -1.441e-8■■■□□ 15.2
NEDD9-204ENST00000448183 CTRLP40313 264 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
NEDD9-204ENST00000448183 C16orf54Q6UWD8 224 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 OPRPNQ99935 248 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-204ENST00000448183 VPREB3Q9UKI3 123 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 FREM1Q5H8C1 2179 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 IGKV1OR2-108A0A075B7D4 117 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 SPRNQ5BIV9 151 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 CACNA1AO00555 2505 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 H3BT86 120 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 ODF1Q14990 250 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 AJUBAQ96IF1 538 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 IGKV3D-7A0A0C4DH55 119 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 IGHV4-59P01825 116 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 FRMD6-AS1P0C7T7 363 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
NEDD9-204ENST00000448183 DEFB112Q30KQ8 113 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 PLA2G2CQ5R387 149 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 BAALCQ8WXS3 180 aa6.03□□□□□ -1.44
NEDD9-204ENST00000448183 A0A0J9YY99 117 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 TRBV10-2A0A0K0K1G8 114 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 WI2-2373I1.2A0A1W2PRP0 233 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 TOMM6Q96B49 74 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 TTC28Q96AY4 2481 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 IGHG2P01859 326 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 DAZ2Q13117 558 aaKnown RBP6.02□□□□□ -1.45
NEDD9-204ENST00000448183 DAZ4Q86SG3 579 aaKnown RBP6.02□□□□□ -1.45
NEDD9-204ENST00000448183 RITA1Q96K30 269 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 DAZ3Q9NR90 486 aaKnown RBP6.02□□□□□ -1.45
NEDD9-204ENST00000448183 TRBV6-1A0A0K0K1D8 114 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 G3V4G9 280 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 Q6ZQT7 251 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 C9orf47Q6ZRZ4 202 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 TICRRQ7Z2Z1 1910 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 ANKHD1Q8IWZ3 2542 aaKnown RBP6.02□□□□□ -1.45
NEDD9-204ENST00000448183 IGKV2D-24A0A075B6R9 120 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 DEFB105AQ8NG35 78 aa6.02□□□□□ -1.45
NEDD9-204ENST00000448183 C11orf86A6NJI1 115 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms