RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 B9D2Q9BPU9 175 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 TM2D3Q9BRN9 247 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 SPXQ9BT56 116 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 SSBP4Q9BWG4 385 aaPredicted RBP14.93□□□□□ -0.02
CHD3-204ENST00000439235 RETNQ9HD89 108 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 GSN-AS1Q9NRJ2 163 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 TRAV9-1A0A075B6T8 112 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 FAM3BP58499 235 aaPredicted RBP14.92□□□□□ -0.02
CHD3-204ENST00000439235 CACNG7P62955 275 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 SCRT2Q9NQ03 307 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 PHLDA3Q9Y5J5 127 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 URGCP-MRPS24S4R325 110 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 NOTCH1P46531 2555 aa14.92□□□□□ -0.02
CHD3-204ENST00000439235 CBLN2Q8IUK8 224 aa14.91□□□□□ -0.02
CHD3-204ENST00000439235 IL17DQ8TAD2 202 aa14.91□□□□□ -0.02
CHD3-204ENST00000439235 BTF3L4Q96K17 158 aa14.91□□□□□ -0.02
CHD3-204ENST00000439235 IGHV4-28A0A0C4DH34 117 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 SPANXN1Q5VSR9 72 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 WDR73Q6P4I2 378 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 TMEM88Q6PEY1 159 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 ZFP82Q8N141 532 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 Q8NAQ8 132 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 SYT8Q8NBV8 401 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 ZMAT4Q9H898 229 aa14.9□□□□□ -0.02
CHD3-204ENST00000439235 A0A1B0GUT8 65 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 PLAC8L1A1L4L8 177 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 SCO1O75880 301 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 DAZ2Q13117 558 aaKnown RBP14.89□□□□□ -0.03
CHD3-204ENST00000439235 RIGQ13278 110 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 OR10AG1Q8NH19 301 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 CNFNQ9BYD5 112 aa14.89□□□□□ -0.03
CHD3-204ENST00000439235 M0R2P5 195 aa14.88□□□□□ -0.03
CHD3-204ENST00000439235 PTH2Q96A98 100 aa14.88□□□□□ -0.03
CHD3-204ENST00000439235 M0R381 172 aa14.87□□□□□ -0.03
CHD3-204ENST00000439235 NXPH4O95158 308 aa14.87□□□□□ -0.03
CHD3-204ENST00000439235 ATP5L2Q7Z4Y8 100 aa14.87□□□□□ -0.03
CHD3-204ENST00000439235 TGP01266 2768 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 IGHV4-4A0A075B6R2 117 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 MUC21A0A0G2JKD1 596 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 MUC21A0A140T8X8 626 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 A0A1B0GW15 77 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 SPINK4O60575 86 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 EMP1P54849 157 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 ELOBQ15370 118 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 PIK3CD-AS1Q5SR53 167 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 NDUFAF3Q9BU61 184 aa14.86□□□□□ -0.03
CHD3-204ENST00000439235 NOP10Q9NPE3 64 aaKnown RBP14.86□□□□□ -0.03
CHD3-204ENST00000439235 S100A8P05109 93 aa14.85□□□□□ -0.03
CHD3-204ENST00000439235 TWIST1Q15672 202 aa14.85□□□□□ -0.03
CHD3-204ENST00000439235 LGALS9BQ3B8N2 356 aa14.85□□□□□ -0.03
CHD3-204ENST00000439235 ZNF876PQ49A33 203 aa14.85□□□□□ -0.03
CHD3-204ENST00000439235 MRPL54Q6P161 138 aaKnown RBP14.85□□□□□ -0.03
CHD3-204ENST00000439235 C11orf68Q9H3H3 251 aaKnown RBP14.85□□□□□ -0.03
CHD3-204ENST00000439235 TRBV24-1A0A075B6N3 115 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 TRGV1A0A0A0MS02 117 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 LYRM9A8MSI8 78 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 NTF3P20783 257 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 SSTP61278 116 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 HBBP68871 147 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 YPEL4Q96NS1 127 aa14.84□□□□□ -0.03
CHD3-204ENST00000439235 MRPL16Q9NX20 251 aaKnown RBP14.84□□□□□ -0.03
CHD3-204ENST00000439235 TEX48A0A1B0GUV7 120 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 TRGC1P0CF51 173 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 NHLRC4P0CG21 123 aaPredicted RBP14.83□□□□□ -0.04
CHD3-204ENST00000439235 DMRTA1Q5VZB9 504 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 RASL11AQ6T310 242 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 RASL10AQ92737 203 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 AP1S3Q96PC3 154 aa14.83□□□□□ -0.04
CHD3-204ENST00000439235 TGIF2-C20orf24A0A0A6YYL0 155 aa14.82□□□□□ -0.04
CHD3-204ENST00000439235 A0A1B0GXF2 115 aa14.82□□□□□ -0.04
CHD3-204ENST00000439235 DEFB4AO15263 64 aa14.82□□□□□ -0.04
CHD3-204ENST00000439235 SMIM15Q7Z3B0 74 aa14.82□□□□□ -0.04
CHD3-204ENST00000439235 COX19Q49B96 90 aa14.81□□□□□ -0.04
CHD3-204ENST00000439235 FAM222AQ5U5X8 452 aa14.81□□□□□ -0.04
CHD3-204ENST00000439235 A8MWV9 139 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 SPART-AS1P0CW21 52 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 CAMPP49913 170 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 Q6ZTI0 123 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 FAM210BQ96KR6 192 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 MSRB1Q9NZV6 116 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 DKK2Q9UBU2 259 aa14.8□□□□□ -0.04
CHD3-204ENST00000439235 GAGE12BA1L429 117 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 GAGE7O76087 117 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 GAGE12FP0CL80 117 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 GAGE12GP0CL81 117 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 GAGE12IP0CL82 117 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 SMIM17P0DL12 118 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 LINC00612Q8N6U2 182 aa14.78□□□□□ -0.04
CHD3-204ENST00000439235 TRGV2A0A075B6R0 118 aa14.77□□□□□ -0.05
CHD3-204ENST00000439235 A0A0J9YWU9 116 aa14.77□□□□□ -0.05
CHD3-204ENST00000439235 GATD1Q8NB37 220 aa14.77□□□□□ -0.05
CHD3-204ENST00000439235 TMEM191AQ9H0A3 160 aa14.77□□□□□ -0.05
CHD3-204ENST00000439235 RS1O15537 224 aa14.76□□□□□ -0.05
CHD3-204ENST00000439235 DEFB130BP0DP73 79 aa14.76□□□□□ -0.05
CHD3-204ENST00000439235 DEFB130AP0DP74 79 aa14.76□□□□□ -0.05
CHD3-204ENST00000439235 RAB4BP61018 213 aa14.76□□□□□ -0.05
CHD3-204ENST00000439235 DPH3P1Q9H4G8 78 aa14.76□□□□□ -0.05
CHD3-204ENST00000439235 TRAV4A0A0B4J268 109 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 COLCA2A8K830 154 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 RHODO00212 210 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms