RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 GTSF1Q8WW33 167 aa16.65■□□□□ 0.26
SMARCAL1-208ENST00000434435 NOP10Q9NPE3 64 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-208ENST00000434435 PHLDA3Q9Y5J5 127 aa16.65■□□□□ 0.26
SMARCAL1-208ENST00000434435 PRKDCP78527 4128 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 SMIM27A0A1W2PRY6 76 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 HIGD1CA8MV81 97 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 CTRLP40313 264 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 SSBP4Q9BWG4 385 aaPredicted RBP16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 SCRT2Q9NQ03 307 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 TMEM242Q9NWH2 141 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 DNAH9Q9NYC9 4486 aa16.64■□□□□ 0.25
SMARCAL1-208ENST00000434435 F2Z2F3 143 aa16.63■□□□□ 0.25
SMARCAL1-208ENST00000434435 M0R2P5 195 aa16.63■□□□□ 0.25
SMARCAL1-208ENST00000434435 NAT8BQ9UHF3 227 aa16.63■□□□□ 0.25
SMARCAL1-208ENST00000434435 FOXA3P55318 350 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-208ENST00000434435 LYZL1Q6UWQ5 148 aa16.62■□□□□ 0.25
SMARCAL1-208ENST00000434435 PGLYRP4Q96LB8 373 aa16.62■□□□□ 0.25
SMARCAL1-208ENST00000434435 A0A0J9YWU9 116 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 LYRM9A8MSI8 78 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 SPINK4O60575 86 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 FAM222AQ5U5X8 452 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 ATRAIDQ6UW56 229 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 ZFP82Q8N141 532 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 SYT8Q8NBV8 401 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 OR10AG1Q8NH19 301 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 BORCS7Q96B45 105 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 FBN3Q75N90 2809 aa16.61■□□□□ 0.25
SMARCAL1-208ENST00000434435 TRGV1A0A0A0MS02 117 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 TEX48A0A1B0GUV7 120 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 CACNG7P62955 275 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 LGALS9BQ3B8N2 356 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 SPANXN1Q5VSR9 72 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 NUP35Q8NFH5 326 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 PTH2Q96A98 100 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 IMMP2LQ96T52 175 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 MRPL16Q9NX20 251 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 DKK2Q9UBU2 259 aa16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 HUWE1Q7Z6Z7 4374 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-208ENST00000434435 COL7A1Q02388 2944 aa16.59■□□□□ 0.25
SMARCAL1-208ENST00000434435 M0R381 172 aa16.59■□□□□ 0.25
SMARCAL1-208ENST00000434435 KCNIP4Q6PIL6 250 aa16.59■□□□□ 0.25
SMARCAL1-208ENST00000434435 MUC21A0A0G2JKD1 596 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 MUC21A0A140T8X8 626 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 SPART-AS1P0CW21 52 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 S100PP25815 95 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 ZNF876PQ49A33 203 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 WDR73Q6P4I2 378 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 CNFNQ9BYD5 112 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 CELA1Q9UNI1 258 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 NACAE9PAV3 2078 aa16.58■□□□□ 0.24
SMARCAL1-208ENST00000434435 NXPH4O95158 308 aa16.57■□□□□ 0.24
SMARCAL1-208ENST00000434435 Q6ZTI0 123 aa16.57■□□□□ 0.24
SMARCAL1-208ENST00000434435 RASL10AQ92737 203 aa16.57■□□□□ 0.24
SMARCAL1-208ENST00000434435 NDUFAF3Q9BU61 184 aa16.57■□□□□ 0.24
SMARCAL1-208ENST00000434435 U3KQK5 164 aa16.57■□□□□ 0.24
SMARCAL1-208ENST00000434435 A0A1B0GUT8 65 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 GAGE12BA1L429 117 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 GAGE7O76087 117 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 GAGE12FP0CL80 117 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 GAGE12GP0CL81 117 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 GAGE12IP0CL82 117 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 FAM3BP58499 235 aaPredicted RBP16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 SSTP61278 116 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 PIK3CD-AS1Q5SR53 167 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 DMRTA1Q5VZB9 504 aa16.56■□□□□ 0.24
SMARCAL1-208ENST00000434435 IGHV4-4A0A075B6R2 117 aa16.55■□□□□ 0.24
SMARCAL1-208ENST00000434435 CXorf65A6NEN9 183 aa16.55■□□□□ 0.24
SMARCAL1-208ENST00000434435 LINC00612Q8N6U2 182 aa16.55■□□□□ 0.24
SMARCAL1-208ENST00000434435 DAD1P61803 113 aa16.54■□□□□ 0.24
SMARCAL1-208ENST00000434435 RIGQ13278 110 aa16.54■□□□□ 0.24
SMARCAL1-208ENST00000434435 URGCP-MRPS24S4R325 110 aa16.54■□□□□ 0.24
SMARCAL1-208ENST00000434435 TRAV9-1A0A075B6T8 112 aa16.53■□□□□ 0.24
SMARCAL1-208ENST00000434435 DEFB130BP0DP73 79 aa16.53■□□□□ 0.24
SMARCAL1-208ENST00000434435 DEFB130AP0DP74 79 aa16.53■□□□□ 0.24
SMARCAL1-208ENST00000434435 NTF3P20783 257 aa16.53■□□□□ 0.24
SMARCAL1-208ENST00000434435 BTF3L4Q96K17 158 aa16.53■□□□□ 0.24
SMARCAL1-208ENST00000434435 TRGV2A0A075B6R0 118 aa16.52■□□□□ 0.24
SMARCAL1-208ENST00000434435 TWIST1Q15672 202 aa16.52■□□□□ 0.24
SMARCAL1-208ENST00000434435 AP1S3Q96PC3 154 aa16.52■□□□□ 0.24
SMARCAL1-208ENST00000434435 A8MWV9 139 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 TRGC1P0CF51 173 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 MRPL54Q6P161 138 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 ATP5L2Q7Z4Y8 100 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 C11orf45Q8TAV5 145 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 SMCO4Q9NRQ5 59 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 MSRB1Q9NZV6 116 aa16.51■□□□□ 0.23
SMARCAL1-208ENST00000434435 A0A1B0GW15 77 aa16.5■□□□□ 0.23
SMARCAL1-208ENST00000434435 C18orf15Q96N68 181 aa16.5■□□□□ 0.23
SMARCAL1-208ENST00000434435 TRAV4A0A0B4J268 109 aa16.49■□□□□ 0.23
SMARCAL1-208ENST00000434435 RS1O15537 224 aa16.49■□□□□ 0.23
SMARCAL1-208ENST00000434435 TMEM88Q6PEY1 159 aa16.49■□□□□ 0.23
SMARCAL1-208ENST00000434435 CBLN2Q8IUK8 224 aa16.49■□□□□ 0.23
SMARCAL1-208ENST00000434435 S100A8P05109 93 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 HBBP68871 147 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 C12orf74Q32Q52 190 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 SMIM15Q7Z3B0 74 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 OR4C5Q8NGB2 326 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 JPT2Q9H910 190 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 EDA2RQ9HAV5 297 aa16.48■□□□□ 0.23
SMARCAL1-208ENST00000434435 A0A1B0GXF2 115 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms