RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 TYMSP04818 313 aa11.88□□□□□ -0.51
TTC28-202ENST00000431039 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
TTC28-202ENST00000431039 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
TTC28-202ENST00000431039 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
TTC28-202ENST00000431039 GRIFINA4D1Z8 144 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 CBY3A6NI87 242 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 ASIPP42127 132 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
TTC28-202ENST00000431039 IGHV3-16A0A0C4DH30 117 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 SMIM27A0A1W2PRY6 76 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 GZMBP10144 247 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 HTN1P15515 57 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
TTC28-202ENST00000431039 PCLOQ9Y6V0 5065 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 IGLC6P0CF74 106 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 S100A4P26447 101 aaKnown RBP11.85□□□□□ -0.51
TTC28-202ENST00000431039 NANOS2P60321 138 aaKnown RBP11.85□□□□□ -0.51
TTC28-202ENST00000431039 LGALS9CQ6DKI2 356 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
TTC28-202ENST00000431039 MDFICQ9P1T7 246 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 X6R8D5 127 aa11.85□□□□□ -0.51
TTC28-202ENST00000431039 PRM2P04554 102 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 AZU1P20160 251 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 RNASE8Q8TDE3 154 aaKnown RBP11.84□□□□□ -0.51
TTC28-202ENST00000431039 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
TTC28-202ENST00000431039 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
TTC28-202ENST00000431039 F2Z2F3 143 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 SNAI2O43623 268 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 ARMS2P0C7Q2 107 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
TTC28-202ENST00000431039 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 SMCO4Q9NRQ5 59 aa11.83□□□□□ -0.52
TTC28-202ENST00000431039 HIGD1CA8MV81 97 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 MIFP14174 115 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 CTRLP40313 264 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 TCL1AP56279 114 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
TTC28-202ENST00000431039 TRAV9-1A0A075B6T8 112 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 H3BVH4 76 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 DEFB4AO15263 64 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 S100PP25815 95 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 SPXQ9BT56 116 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
TTC28-202ENST00000431039 PLAC8L1A1L4L8 177 aa11.8□□□□□ -0.52
TTC28-202ENST00000431039 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
TTC28-202ENST00000431039 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
TTC28-202ENST00000431039 PTH2Q96A98 100 aa11.8□□□□□ -0.52
TTC28-202ENST00000431039 TPPP3Q9BW30 176 aa11.8□□□□□ -0.52
TTC28-202ENST00000431039 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
TTC28-202ENST00000431039 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
TTC28-202ENST00000431039 CACNG7P62955 275 aa11.79□□□□□ -0.52
TTC28-202ENST00000431039 Q8NAQ8 132 aa11.79□□□□□ -0.52
TTC28-202ENST00000431039 BTF3L4Q96K17 158 aa11.79□□□□□ -0.52
TTC28-202ENST00000431039 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
TTC28-202ENST00000431039 PHLDA3Q9Y5J5 127 aa11.79□□□□□ -0.52
TTC28-202ENST00000431039 TIMM8BQ9Y5J9 83 aaPredicted RBP11.79□□□□□ -0.52
TTC28-202ENST00000431039 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 M0R2P5 195 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 BORCS7Q96B45 105 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 URGCP-MRPS24S4R325 110 aa11.78□□□□□ -0.52
TTC28-202ENST00000431039 A0A1B0GUT8 65 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 SCO1O75880 301 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 NXPH4O95158 308 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 RIGQ13278 110 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 ZFP82Q8N141 532 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 OR10AG1Q8NH19 301 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 YPEL4Q96NS1 127 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 DNAH17Q9UFH2 4485 aa11.77□□□□□ -0.53
TTC28-202ENST00000431039 SPINK4O60575 86 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 ELOBQ15370 118 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 LGALS9BQ3B8N2 356 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 SPANXN1Q5VSR9 72 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 ATP5L2Q7Z4Y8 100 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 NDUFAF3Q9BU61 184 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 FAT2Q9NYQ8 4349 aa11.76□□□□□ -0.53
TTC28-202ENST00000431039 DNAH2Q9P225 4427 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms