RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 C12orf57Q99622 126 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 TXNDC17Q9BRA2 123 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 PYGO2Q9BRQ0 406 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 LINC00467Q9BRT7 94 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 SLC50A1Q9BRV3 221 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 SMIM3Q9BZL3 60 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 FUT9Q9Y231 359 aa5.36□□□□□ -1.55
ECHDC1-207ENST00000430841 TRAV12-3A0A0B4J271 114 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 C9JQL5 133 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 H3BRN7 92 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 AGPAT2O15120 278 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 HMGB3O15347 200 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 SSSCA1O60232 199 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 LINC00869P0C866 280 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 S100PP25815 95 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 SELENOTP62341 195 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 POLR2GP62487 172 aaKnown RBP eCLIP5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 ZNF415Q09FC8 603 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 GFI1BQ5VTD9 330 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 Q6ZTI0 123 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 NEGR1Q7Z3B1 354 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 SHANK2-AS3Q9BTD1 123 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 VPS13BQ7Z7G8 4022 aa5.35□□□□□ -1.55
ECHDC1-207ENST00000430841 TRAV8-2A0A0B4J237 113 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 TRGV4A0A0C4DH28 118 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 TMEM250H0YL14 139 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 CRYGDP07320 174 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 GATA2P23769 480 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 DAZ2Q13117 558 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 CYP2G1PQ6ZSU1 146 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 LINC00612Q8N6U2 182 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 PSENENQ9NZ42 101 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 PRO0255Q9UI72 69 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 VAX2Q9UIW0 290 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 PXMP4Q9Y6I8 212 aa5.34□□□□□ -1.55
ECHDC1-207ENST00000430841 TRBV24-1A0A075B6N3 115 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 A0A087X0K7 114 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 C17orf112F2Z3M2 114 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 H3BQ15 152 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 COX7A2P2O60397 106 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 MPDU1O75352 247 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 BCL2P10415 239 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 RPL35P42766 123 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 SPANXN5Q5MJ07 72 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 TMEM14EPQ6UXP3 125 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 GGACTQ9BVM4 153 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 WDR61Q9GZS3 305 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 SH3BGRL3Q9H299 93 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 OR51M1Q9H341 326 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 MANBALQ9NQG1 85 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 GSN-AS1Q9NRJ2 163 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 KCNIP2Q9NS61 270 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
ECHDC1-207ENST00000430841 PMS2P5A8MQ11 134 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 H3BP45 60 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 ZNF324O75467 553 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 EIF3GO75821 320 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 CST7O76096 145 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 SLC25A5P05141 298 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 PRB4P10163 310 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 VWC2Q2TAL6 325 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 VSIG2Q96IQ7 327 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 Q9HAA7 133 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 HHLA3Q9XRX5 114 aa5.32□□□□□ -1.56
ECHDC1-207ENST00000430841 IGKV1OR2-108A0A075B7D4 117 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 CTXND1A0A1B0GTU2 59 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 C7orf71A4D174 169 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 C9JCJ5 164 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 RS1O15537 224 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 ORM1P02763 201 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 S100A2P29034 98 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 FHITP49789 147 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 FABP9Q0Z7S8 132 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 ELOBQ15370 118 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 LYPD5Q6UWN5 251 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 OR10P1Q8NGE3 313 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 ODF3Q96PU9 254 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 IMMP2LQ96T52 175 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 VGLL1Q99990 258 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 SDF2L1Q9HCN8 221 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 SLC39A9Q9NUM3 307 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 NAT8Q9UHE5 227 aa5.31□□□□□ -1.56
ECHDC1-207ENST00000430841 TRAV8-6A0A0B4J262 113 aa5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 FNDC10F2Z333 226 aa5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 PPP1R2P9O14990 202 aa5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 GPX1P07203 203 aa5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 SNRPCP09234 159 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 RPS10P46783 165 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-207ENST00000430841 TCL1AP56279 114 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms