RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
LINC00839-202ENST00000429940 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 LINC01619G3V211 115 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 NPFFO15130 113 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 ASIPP42127 132 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 TMEM219Q86XT9 240 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 OR10J6PQ8NGY7 276 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 DOPEY2Q9Y3R5 2298 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 MGPP08493 103 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 ARL3P36405 182 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 LINC00527Q9UJ94 153 aa11.39□□□□□ -0.59
LINC00839-202ENST00000429940 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 SAMD13Q5VXD3 122 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 BAALCQ8WXS3 180 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 ABCA12Q86UK0 2595 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 UBTD1Q9HAC8 227 aa11.38□□□□□ -0.59
LINC00839-202ENST00000429940 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 OVOL1O14753 267 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 LGALS1P09382 135 aaKnown RBP11.37□□□□□ -0.59
LINC00839-202ENST00000429940 DEFB1P60022 68 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 ANXA2RQ3ZCQ2 193 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 UNQ9165/PRO28630Q6UXU0 137 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 J3QR89 54 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 SCGB2A2Q13296 93 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 GAGE13Q4V321 117 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
LINC00839-202ENST00000429940 AGRNO00468 2067 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 MED13LQ71F56 2210 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
LINC00839-202ENST00000429940 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 PRADC1Q9BSG0 188 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
LINC00839-202ENST00000429940 TSSC4Q9Y5U2 329 aaPredicted RBP11.36□□□□□ -0.59
LINC00839-202ENST00000429940 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 AZU1P20160 251 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 LMO4P61968 165 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 ETDBQ3ZM63 59 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 MTURNQ8N3F0 131 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 SIGMAR1Q99720 223 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 PRSS29PA6NIE9 313 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 SOCS3O14543 225 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
LINC00839-202ENST00000429940 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
LINC00839-202ENST00000429940 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
LINC00839-202ENST00000429940 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
LINC00839-202ENST00000429940 PTPN13Q12923 2485 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 NDUFA4O00483 81 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 GNRH2O43555 120 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 MORN3Q6PF18 240 aaPredicted RBP11.34□□□□□ -0.59
LINC00839-202ENST00000429940 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 PRO0461Q9UI25 63 aa11.34□□□□□ -0.59
LINC00839-202ENST00000429940 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 F6UB75 175 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 SCGB1D4Q6XE38 83 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
LINC00839-202ENST00000429940 PPP1R17O96001 155 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
LINC00839-202ENST00000429940 NRGNQ92686 78 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
LINC00839-202ENST00000429940 FASNP49327 2511 aaKnown RBP11.32□□□□□ -0.6
LINC00839-202ENST00000429940 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
LINC00839-202ENST00000429940 APCP25054 2843 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 A6NJY4 79 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 CRIP2P52943 208 aaPredicted RBP11.32□□□□□ -0.6
LINC00839-202ENST00000429940 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
LINC00839-202ENST00000429940 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
LINC00839-202ENST00000429940 COX6B1P14854 86 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 SRSF9Q13242 221 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00839-202ENST00000429940 APRG1Q8IVJ8 170 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 CRYGDP07320 174 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 HIST2H2BCQ6DN03 193 aa11.3□□□□□ -0.6
LINC00839-202ENST00000429940 ZFHX3Q15911 3703 aa11.29□□□□□ -0.6
LINC00839-202ENST00000429940 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
LINC00839-202ENST00000429940 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
LINC00839-202ENST00000429940 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms