RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RRN3P1Q2M238 152 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 TRGV11A0A075B6L2 103 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 ADAMTS20P59510 1910 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 IGKV2D-26A0A0A0MRZ7 120 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
CPNE4-201ENST00000429747 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
CPNE4-201ENST00000429747 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
CPNE4-201ENST00000429747 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
CPNE4-201ENST00000429747 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
CPNE4-201ENST00000429747 TCF15Q12870 199 aa9.72□□□□□ -0.85
CPNE4-201ENST00000429747 MRPL53Q96EL3 112 aaKnown RBP9.72□□□□□ -0.85
CPNE4-201ENST00000429747 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
CPNE4-201ENST00000429747 FGF6P10767 208 aa9.71□□□□□ -0.85
CPNE4-201ENST00000429747 COX6B1P14854 86 aa9.71□□□□□ -0.85
CPNE4-201ENST00000429747 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-201ENST00000429747 ZNF48Q96MX3 618 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-201ENST00000429747 LY6LH3BQJ8 138 aa9.71□□□□□ -0.85
CPNE4-201ENST00000429747 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.85
CPNE4-201ENST00000429747 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-201ENST00000429747 A0A1W2PRX2 142 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 FSTL3O95633 263 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 USP9YO00507 2555 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 J3QQQ9 107 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 TIMM21Q9BVV7 248 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 SMAD5-AS1Q9Y6J3 95 aa9.71□□□□□ -0.86
CPNE4-201ENST00000429747 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 B4DSR2 109 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 M0R2P5 195 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 BLCAPP62952 87 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 ADORA2A-AS1P86434 159 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 MAPK1IP1LQ8NDC0 245 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
CPNE4-201ENST00000429747 G3V4G9 280 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 DEFB131AP59861 70 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 UNQ9165/PRO28630Q6UXU0 137 aa9.7□□□□□ -0.86
CPNE4-201ENST00000429747 CCDC168Q8NDH2 2452 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 TMEM95Q3KNT9 176 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 C9orf47Q6ZRZ4 202 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
CPNE4-201ENST00000429747 PRO1854Q9UHT4 67 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 ODF3BA8MYP8 253 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 TRBV12-3P01733 135 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 IGF1P05019 195 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 MSMBP08118 114 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
CPNE4-201ENST00000429747 RNF185Q96GF1 192 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 TLN2Q9Y4G6 2542 aa9.69□□□□□ -0.86
CPNE4-201ENST00000429747 C5orf56Q8N8D9 126 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-201ENST00000429747 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 ZFAND6Q6FIF0 208 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 U3KQK5 164 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 SETD2Q9BYW2 2564 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-201ENST00000429747 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
CPNE4-201ENST00000429747 TSPAN13O95857 204 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 USP9XQ93008 2570 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-201ENST00000429747 TNFRSF13BO14836 293 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-201ENST00000429747 BAALCQ8WXS3 180 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 SIRPDQ9H106 197 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 JPT2Q9H910 190 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 TNRC6BQ9UPQ9 1833 aaKnown RBP9.67□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 DNAL4O96015 105 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 MAPKAPK5-AS1Q8N8E1 139 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 AJUBAQ96IF1 538 aa9.67□□□□□ -0.86
CPNE4-201ENST00000429747 SPEGQ15772 3267 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 SUMO4Q6EEV6 95 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 GATD1Q8NB37 220 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 NAV2Q8IVL1 2488 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
CPNE4-201ENST00000429747 I3L3M4 83 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms