RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TMEM78Q5T7P6 136 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 OR10J6PQ8NGY7 276 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 A8MWL6 223 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 ID1P41134 155 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 LYPD1Q8N2G4 141 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 TPPP3Q9BW30 176 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 FAM231BA6NCW3 169 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 GIG44P09565 113 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 BMI1P35226 326 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 HBBP68871 147 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 AMTNQ6UX39 209 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 GTSF1Q8WW33 167 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 BORCS7Q96B45 105 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 URB1-AS1Q96HZ7 61 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 DEFB4AO15263 64 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 CRXO43186 299 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 P01737 135 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 ZNF138P52744 262 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 EBLN2Q6P2I7 272 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 MRAPQ8TCY5 172 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 RETNQ9HD89 108 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 RNF24Q9Y225 148 aa6.98□□□□□ -1.29
HMGCLL1-206ENST00000428842 GNRH2O43555 120 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 IGLC3P0DOY3 106 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 NTF3P20783 257 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 CAMPP49913 170 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 STHQ8IWL8 128 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 SH2D1AO60880 128 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 HSBP1O75506 76 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 HLA-DRB4P13762 266 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 S100A7P31151 101 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 FAM162BQ5T6X4 162 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 C9orf47Q6ZRZ4 202 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 PPP1R14DQ9NXH3 145 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 HLA-DRB4X5D2U9 266 aa6.97□□□□□ -1.29
HMGCLL1-206ENST00000428842 DNAH9Q9NYC9 4486 aa6.96□□□□□ -1.29
HMGCLL1-206ENST00000428842 IGHV4-30-4P0DP06 118 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 GTSCR1Q86UQ5 136 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 FAM110AQ9BQ89 295 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 IGKV3D-20A0A0C4DH25 116 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 ORM1P02763 201 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 AZU1P20160 251 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 FOXI2Q6ZQN5 318 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 OR2D3Q8NGH3 330 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 PGLYRP4Q96LB8 373 aa6.96□□□□□ -1.3
HMGCLL1-206ENST00000428842 K7EQM0 130 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 DEFB135Q30KP9 77 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 DMRTA1Q5VZB9 504 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 RNASEKQ6P5S7 137 aaKnown RBP6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 NDFIP1Q9BT67 221 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 C20orf202A1L168 122 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 ZNF25P17030 456 aaPredicted RBP6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 GAGE1Q13065 139 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 TRPT1Q86TN4 253 aaKnown RBP6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 GATD1Q8NB37 220 aa6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 CHCHD1Q96BP2 118 aaKnown RBP6.95□□□□□ -1.3
HMGCLL1-206ENST00000428842 TRAV25A0A0B4J276 109 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 DLEU1O43261 78 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 G0S2P27469 103 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 EMP1P54849 157 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 SAMD5Q5TGI4 173 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 FAM19A4Q96LR4 140 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 TMEM208Q9BTX3 173 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 MSRB1Q9NZV6 116 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 ZFP30Q9Y2G7 519 aa6.94□□□□□ -1.3
HMGCLL1-206ENST00000428842 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 CDKN1BP46527 198 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 RIPPLY3P57055 190 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 ANXA2RQ3ZCQ2 193 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 INSL3P51460 131 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 COL5A1-AS1Q5SY13 56 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
HMGCLL1-206ENST00000428842 IGHV1-24A0A0C4DH33 117 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 K7EIL1 84 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 HNRNPA3P51991 378 aaKnown RBP6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 Q6ZN92 141 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 MRPS16Q9Y3D3 137 aaKnown RBP6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 KLLNB2CW77 178 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms