RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 Q9UF83 564 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 URGCP-MRPS24S4R325 110 aa10.8□□□□□ -0.68
CHCHD3-202ENST00000423635 TAAR5O14804 337 aa10.79□□□□□ -0.68
CHCHD3-202ENST00000423635 FGF8P55075 233 aaPredicted RBP10.79□□□□□ -0.68
CHCHD3-202ENST00000423635 KHDC3LQ587J8 217 aa10.79□□□□□ -0.68
CHCHD3-202ENST00000423635 PARLQ9H300 379 aa10.79□□□□□ -0.68
CHCHD3-202ENST00000423635 C17orf112F2Z3M2 114 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 RNASE3P12724 160 aaKnown RBP10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 TAS2R45P59539 299 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 CHCHD7Q9BUK0 85 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 SAMD10Q9BYL1 202 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 MBD2Q9UBB5 411 aa10.78□□□□□ -0.68
CHCHD3-202ENST00000423635 A8MWV9 139 aa10.77□□□□□ -0.69
CHCHD3-202ENST00000423635 ELOBQ15370 118 aa10.77□□□□□ -0.69
CHCHD3-202ENST00000423635 PIK3CD-AS1Q5SR53 167 aa10.77□□□□□ -0.69
CHCHD3-202ENST00000423635 PLA2G10O15496 165 aa10.76□□□□□ -0.69
CHCHD3-202ENST00000423635 TCRBP04435 133 aa10.76□□□□□ -0.69
CHCHD3-202ENST00000423635 Q0VG73 95 aa10.76□□□□□ -0.69
CHCHD3-202ENST00000423635 UFSP1Q6NVU6 142 aa10.76□□□□□ -0.69
CHCHD3-202ENST00000423635 OR2T35Q8NGX2 323 aa10.76□□□□□ -0.69
CHCHD3-202ENST00000423635 IL7P13232 177 aa10.75□□□□□ -0.69
CHCHD3-202ENST00000423635 DGAT2L7PQ6IED9 249 aa10.75□□□□□ -0.69
CHCHD3-202ENST00000423635 TRAV6A0A075B6T7 132 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 A0A087WX48 190 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 FFAR4Q5NUL3 377 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
CHCHD3-202ENST00000423635 A0A0D9SG52 128 aa10.73□□□□□ -0.69
CHCHD3-202ENST00000423635 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
CHCHD3-202ENST00000423635 GNG5P63218 68 aa10.73□□□□□ -0.69
CHCHD3-202ENST00000423635 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
CHCHD3-202ENST00000423635 LYRM1O43325 122 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 GCGP01275 180 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 PQLC2Q6ZP29 291 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 NUDT15Q9NV35 164 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 OR5AC2Q9NZP5 309 aa10.72□□□□□ -0.69
CHCHD3-202ENST00000423635 PANO1I0J062 215 aa10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 ASIPP42127 132 aa10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 LGALSLQ3ZCW2 172 aaPredicted RBP10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 OR10G7Q8NGN6 311 aa10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 JPT2Q9H910 190 aa10.71□□□□□ -0.69
CHCHD3-202ENST00000423635 USP17L23D6RBM5 183 aa10.7□□□□□ -0.7
CHCHD3-202ENST00000423635 PRSS1P07477 247 aa10.7□□□□□ -0.7
CHCHD3-202ENST00000423635 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
CHCHD3-202ENST00000423635 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
CHCHD3-202ENST00000423635 IGKV3D-20A0A0C4DH25 116 aa10.69□□□□□ -0.7
CHCHD3-202ENST00000423635 H0YIZ8 118 aa10.69□□□□□ -0.7
CHCHD3-202ENST00000423635 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
CHCHD3-202ENST00000423635 PSG8Q9UQ74 426 aa10.69□□□□□ -0.7
CHCHD3-202ENST00000423635 CCDC160A6NGH7 325 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 RHODO00212 210 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 TCRAP04437 139 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 H2AFB2P0C5Z0 115 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 OR2G3Q8NGZ4 309 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
CHCHD3-202ENST00000423635 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
CHCHD3-202ENST00000423635 RPL19P84098 196 aaKnown RBP10.67□□□□□ -0.7
CHCHD3-202ENST00000423635 ZFP69Q49AA0 526 aa10.67□□□□□ -0.7
CHCHD3-202ENST00000423635 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
CHCHD3-202ENST00000423635 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
CHCHD3-202ENST00000423635 A0A1W2PPV4 95 aa10.66□□□□□ -0.7
CHCHD3-202ENST00000423635 K7EQM0 130 aa10.66□□□□□ -0.7
CHCHD3-202ENST00000423635 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
CHCHD3-202ENST00000423635 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
CHCHD3-202ENST00000423635 RBM38Q9H0Z9 239 aaKnown RBP10.66□□□□□ -0.7
CHCHD3-202ENST00000423635 TMEM262E9PQX1 116 aa10.65□□□□□ -0.7
CHCHD3-202ENST00000423635 CRPP02741 224 aa10.65□□□□□ -0.7
CHCHD3-202ENST00000423635 FLI1Q01543 452 aaPredicted RBP10.65□□□□□ -0.7
CHCHD3-202ENST00000423635 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
CHCHD3-202ENST00000423635 LINC01600Q96MT4 127 aa10.65□□□□□ -0.7
CHCHD3-202ENST00000423635 TRBV10-1A0A0K0K1A3 114 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 SIX6O95475 246 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 UBE2D3P61077 147 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 UBE2D2P62837 147 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 PRNTQ86SH4 94 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 C15orf54Q8N8G6 183 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 SUN5Q8TC36 379 aa10.64□□□□□ -0.71
CHCHD3-202ENST00000423635 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 HLA-DQA1P01909 254 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 MIAQ16674 131 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 LRRC37A5PQ49AS3 106 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 DNLZQ5SXM8 178 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 SFRP2Q96HF1 295 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 HSPB11Q9Y547 144 aa10.63□□□□□ -0.71
CHCHD3-202ENST00000423635 TRBV6-8A0A0A6YYG3 113 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms