RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CTRLP40313 264 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 Q6ZWC4 215 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 ZFAND2AQ8N6M9 145 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 LINC00477Q96M19 166 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 G3V4G9 280 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 H3BMM0 161 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 ZNF324O75467 553 aaPredicted RBP6.6□□□□□ -1.35
HPS4-204ENST00000422379 PMCHP20382 165 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 AMTP48728 403 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 INSL3P51460 131 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 SSTP61278 116 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 Q8N1Y9 231 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 FER1L6-AS1Q8NA97 138 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 PRO1933Q9H354 126 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 C11orf21Q9P2W6 132 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 IGKV3D-20A0A0C4DH25 116 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 MUC21A0A0G2JKD1 596 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 A8MTW9 85 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 J3KRW8 73 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 HLA-DRB4P13762 266 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 FOXI2Q6ZQN5 318 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 URB1-AS1Q96HZ7 61 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 HLA-DRB4X5D2U9 266 aa6.59□□□□□ -1.35
HPS4-204ENST00000422379 M0R2Z0 102 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 FXYD7P58549 80 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 ZNF493Q6ZR52 646 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 DEFB125Q8N687 156 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 C14orf144Q96I85 54 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 OR11H12B2RN74 326 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 NTF3P20783 257 aa6.58□□□□□ -1.36
HPS4-204ENST00000422379 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 MCRIP2Q9BUT9 160 aaKnown RBP6.58□□□□□ -1.36
HPS4-204ENST00000422379 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 CRXO43186 299 aaPredicted RBP6.57□□□□□ -1.36
HPS4-204ENST00000422379 HSBP1O75506 76 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 EGFEM1PQ0D2K5 195 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 SPINK13Q1W4C9 94 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 EBLN2Q6P2I7 272 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 TRPT1Q86TN4 253 aaKnown RBP6.57□□□□□ -1.36
HPS4-204ENST00000422379 NIT1Q86X76 327 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
HPS4-204ENST00000422379 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
HPS4-204ENST00000422379 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 KLLNB2CW77 178 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 GHRHP01286 108 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 TWIST1Q15672 202 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 FAM110AQ9BQ89 295 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 MSRB1Q9NZV6 116 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
HPS4-204ENST00000422379 KRTDAPP60985 99 aa6.56□□□□□ -1.36
HPS4-204ENST00000422379 PRM2P04554 102 aa6.55□□□□□ -1.36
HPS4-204ENST00000422379 RPL35AP18077 110 aaKnown RBP6.55□□□□□ -1.36
HPS4-204ENST00000422379 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
HPS4-204ENST00000422379 MRPL51Q4U2R6 128 aaKnown RBP6.55□□□□□ -1.36
HPS4-204ENST00000422379 ZNF664Q8N3J9 261 aa6.55□□□□□ -1.36
HPS4-204ENST00000422379 ODF3Q96PU9 254 aa6.55□□□□□ -1.36
HPS4-204ENST00000422379 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
HPS4-204ENST00000422379 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
HPS4-204ENST00000422379 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
HPS4-204ENST00000422379 TRAV21A0A0B4J279 112 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 D6R8Y8 96 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 PRB2P02812 416 aaPredicted RBP6.54□□□□□ -1.36
HPS4-204ENST00000422379 LEPP41159 167 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 Q8N976 141 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
HPS4-204ENST00000422379 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 U3KQK5 164 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 IGHV1-24A0A0C4DH33 117 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 SNAI2O43623 268 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 LINC00614P0C842 121 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 C3orf79P0CE67 100 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 TSPOP30536 169 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 STHQ8IWL8 128 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 RNF185Q96GF1 192 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
HPS4-204ENST00000422379 A0A1B0GV90 55 aa6.53□□□□□ -1.36
HPS4-204ENST00000422379 SMKR1H3BMG3 65 aa6.53□□□□□ -1.36
HPS4-204ENST00000422379 H3BVH4 76 aa6.53□□□□□ -1.36
HPS4-204ENST00000422379 OR5AL1P0C617 328 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms