RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CTAGE3PQ8IX95 158 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 LINC00269Q8N2A0 174 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 Q8N2B8 174 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR4B1Q8NGF8 309 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 MAGOHBQ96A72 148 aaKnown RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 LINC00467Q9BRT7 94 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 C14orf132Q9NPU4 83 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 SAR1AQ9NR31 198 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 LSM2Q9Y333 95 aaKnown RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 LY96Q9Y6Y9 160 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 HLA-DRB4X5D2U9 266 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 NHSL1Q5SYE7 1610 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 SCN7AQ01118 1682 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 TNRC6CQ9HCJ0 1690 aaKnown RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 ANKRD31Q8N7Z5 1873 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 COL24A1Q17RW2 1714 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 DUOX1Q9NRD9 1551 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 PTPRBP23467 1997 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 BPTFQ12830 3046 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 TRAV27A0A087WT01 109 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 TRGV4A0A0C4DH28 118 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 SMIM31A0A1B0GVY4 71 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 PVALEFA0A1B0GWK0 134 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR2T8A6NH00 312 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 E7EUB6 86 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 ZNF670-ZNF695F2Z2N8 137 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 H3BRN7 92 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 PITX3O75364 302 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 GPX1P07203 203 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 TPT1P13693 172 aaKnown RBP1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 DSCR4P56555 118 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 PDE6HQ13956 83 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 KRTAP26-1Q6PEX3 210 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 HAGHLQ6PII5 290 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 GLIPR1L1Q6UWM5 242 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 CLECL1Q8IZS7 167 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 MGAMO43451 1857 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 SBF1O95248 1867 aa1.34□□□□□ -2.19
HMGB1P49-201ENST00000418882 PHLPP1O60346 1717 aa1.34□□□□□ -2.2
HMGB1P49-201ENST00000418882 DDX60LQ5H9U9 1706 aaKnown RBP1.34□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZFHX2Q9C0A1 2572 aaPredicted RBP1.34□□□□□ -2.2
HMGB1P49-201ENST00000418882 TMEM2Q9UHN6 1383 aa1.34□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF142P52746 1687 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 DOT1LQ8TEK3 1739 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 A0A087WSZ3 146 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 C9orf170A2RU37 121 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 EDF1O60869 148 aaKnown RBP1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 COPZ1P61923 177 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 SELENOWP63302 87 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 CDK6Q00534 326 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 OR5D14Q8NGL3 314 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 C10orf82Q8WW14 230 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 MCEEQ96PE7 176 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 OR4C12Q96R67 309 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 FAIMQ9NVQ4 179 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 TPRKBQ9Y3C4 175 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 ANK1P16157 1881 aa1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 CICQ96RK0 1608 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P49-201ENST00000418882 ALPK3Q96L96 1907 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 COL4A5P29400 1685 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 NHSQ6T4R5 1651 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 TNS3Q68CZ2 1445 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 NINQ8N4C6 2090 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 KCPQ6ZWJ8 1503 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 SPAARA0A1B0GVQ0 90 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 MIF4GDA9UHW6 222 aaKnown RBP1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 C17orf112F2Z3M2 114 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 F8W036 122 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 APOC1P02654 83 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 CD2P06729 351 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 CNBPP62633 177 aaKnown RBP1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 EMX2Q04743 252 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 CLLU1Q5K131 121 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZCCHC23Q6ZST2 131 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 ARPINQ7Z6K5 226 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 LINC00471Q8N535 108 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 OTOSQ8NHW6 89 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 SFT2D1Q8WV19 159 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 ARL11Q969Q4 196 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 TXNDC17Q9BRA2 123 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 DOCK1Q14185 1865 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 NRAPQ86VF7 1730 aa1.32□□□□□ -2.2
HMGB1P49-201ENST00000418882 SIP14410 1827 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 NCKAP5O14513 1909 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 POLEQ07864 2286 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 MYLKQ15746 1914 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRAV10A0A0B4J240 114 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 J3QR89 54 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 LYRM1O43325 122 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 PROSCO94903 275 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRACP01848 142 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 RNASE3P12724 160 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms