RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 BMI1P35226 326 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 LINC01545Q5VT33 79 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 DYNLRB2Q8TF09 96 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 A6NDN8 102 aa11.64□□□□□ -0.55
SHMT2-202ENST00000414700 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-202ENST00000414700 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
SHMT2-202ENST00000414700 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
SHMT2-202ENST00000414700 C16orf92Q96LL3 132 aa11.63□□□□□ -0.55
SHMT2-202ENST00000414700 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
SHMT2-202ENST00000414700 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
SHMT2-202ENST00000414700 ZC2HC1AQ96GY0 325 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SIGLEC8Q9NYZ4 499 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 AGRNO00468 2067 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 DEFB1P60022 68 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 LYPD1Q8N2G4 141 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SGK494Q96LW2 274 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
SHMT2-202ENST00000414700 AAMDCQ9H7C9 122 aa11.62□□□□□ -0.55
SHMT2-202ENST00000414700 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
SHMT2-202ENST00000414700 CT83Q5H943 113 aa11.61□□□□□ -0.55
SHMT2-202ENST00000414700 RBPMS2Q6ZRY4 209 aaKnown RBP11.61□□□□□ -0.55
SHMT2-202ENST00000414700 OR5A1Q8NGJ0 315 aa11.61□□□□□ -0.55
SHMT2-202ENST00000414700 NDFIP1Q9BT67 221 aa11.61□□□□□ -0.55
SHMT2-202ENST00000414700 EPDR1Q9UM22 224 aa11.61□□□□□ -0.55
SHMT2-202ENST00000414700 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
SHMT2-202ENST00000414700 A8MWL6 223 aa11.6□□□□□ -0.55
SHMT2-202ENST00000414700 IGLV1-51P01701 117 aa11.6□□□□□ -0.55
SHMT2-202ENST00000414700 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
SHMT2-202ENST00000414700 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
SHMT2-202ENST00000414700 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 H3BUT2 72 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 K7EQG2 157 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 TCRAP04437 139 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 MCRIP2Q9BUT9 160 aaKnown RBP11.59□□□□□ -0.55
SHMT2-202ENST00000414700 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-202ENST00000414700 H0Y8G0 127 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-202ENST00000414700 FGF6P10767 208 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 ASCL2Q99929 193 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 GFRA4Q9GZZ7 299 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
SHMT2-202ENST00000414700 TMEM238LA0A1B0GVL6 79 aa11.58□□□□□ -0.56
SHMT2-202ENST00000414700 HSD52Q0P140 79 aa11.58□□□□□ -0.56
SHMT2-202ENST00000414700 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-202ENST00000414700 F6UB75 175 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 KIR3DS1Q14943 382 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 PSG3Q16557 428 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 WFDC9Q8NEX5 89 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
SHMT2-202ENST00000414700 SNAI2O43623 268 aa11.56□□□□□ -0.56
SHMT2-202ENST00000414700 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
SHMT2-202ENST00000414700 P01737 135 aa11.56□□□□□ -0.56
SHMT2-202ENST00000414700 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
SHMT2-202ENST00000414700 VGLL1Q99990 258 aa11.56□□□□□ -0.56
SHMT2-202ENST00000414700 A0A1W2PPM0 123 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 SPAG8Q99932 426 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-202ENST00000414700 MLST8Q9BVC4 326 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 SPCS1Q9Y6A9 102 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 C19orf71A6NCJ1 209 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 CSN1S1P47710 185 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 ZNF138P52744 262 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 ERCC8Q13216 396 aa11.55□□□□□ -0.56
SHMT2-202ENST00000414700 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
SHMT2-202ENST00000414700 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
SHMT2-202ENST00000414700 SIVA1O15304 175 aa11.54□□□□□ -0.56
SHMT2-202ENST00000414700 ID1P41134 155 aa11.54□□□□□ -0.56
SHMT2-202ENST00000414700 BOD1L2Q8IYS8 172 aa11.54□□□□□ -0.56
SHMT2-202ENST00000414700 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
SHMT2-202ENST00000414700 C9orf66Q5T8R8 295 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 Q8TAT8 98 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
SHMT2-202ENST00000414700 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 NCR2O95944 276 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 DEFB131AP59861 70 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 LINC00322Q6ZN03 302 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-202ENST00000414700 FMC1Q96HJ9 113 aa11.53□□□□□ -0.56
SHMT2-202ENST00000414700 NAA38Q9BRA0 125 aaKnown RBP11.53□□□□□ -0.56
SHMT2-202ENST00000414700 DNHD1Q96M86 4753 aa11.52□□□□□ -0.56
SHMT2-202ENST00000414700 LTAP01374 205 aa11.52□□□□□ -0.56
SHMT2-202ENST00000414700 FABP2P12104 132 aa11.52□□□□□ -0.56
SHMT2-202ENST00000414700 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.56
SHMT2-202ENST00000414700 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.56
SHMT2-202ENST00000414700 TIMM8BQ9Y5J9 83 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-202ENST00000414700 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.56
SHMT2-202ENST00000414700 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
SHMT2-202ENST00000414700 A0A1B0GV72 72 aa11.52□□□□□ -0.57
SHMT2-202ENST00000414700 CD7P09564 240 aa11.52□□□□□ -0.57
SHMT2-202ENST00000414700 AZU1P20160 251 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms