RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 PPP1R1CQ8WVI7 109 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 TMEM141Q96I45 108 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 DSCR8Q96T75 97 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 BATF3Q9NR55 127 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 COA4Q9NYJ1 87 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 HELZP42694 1942 aaKnown RBP0.22□□□□□ -2.37
HDAC9-205ENST00000411993 DLEC1Q9Y238 1755 aa0.22□□□□□ -2.37
HDAC9-205ENST00000411993 TRAV2A0A0B4J234 112 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 TCRBV3S1A0A5B6 114 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 ZNF670-ZNF695F2Z2N8 137 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 J3QLW9 94 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 MPC1LP0DKB6 136 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 SLC25A6P12236 298 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 NCS1P62166 190 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 MORN2Q502X0 79 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 DYNLRB2Q8TF09 96 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 LZICQ8WZA0 190 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 UHRF1BP1LA0JNW5 1464 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
HDAC9-205ENST00000411993 RBBP6Q7Z6E9 1792 aaKnown RBP0.2□□□□□ -2.38
HDAC9-205ENST00000411993 CXorf51AA0A1B0GTR3 108 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 PYYP10082 97 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 CKS1BP61024 79 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 SPINK6Q6UWN8 80 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 ATP11AUNQ6ZP68 121 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 CYP2G1PQ6ZSU1 146 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 MMGT1Q8N4V1 131 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 BET1LQ9NYM9 111 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 LSM2Q9Y333 95 aaKnown RBP0.2□□□□□ -2.38
HDAC9-205ENST00000411993 UNC13AQ9UPW8 1703 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 APCP25054 2843 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 KMT2DO14686 5537 aa0.2□□□□□ -2.38
HDAC9-205ENST00000411993 SPAG17Q6Q759 2223 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 SYNJ1O43426 1573 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ESPL1Q14674 2120 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ERCC6Q03468 1493 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 TRBV20-1A0A075B6N2 111 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 A0A096LNT2 108 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 F2Z2F3 143 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 J3QR89 54 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 M0R2P5 195 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ARPC5O15511 151 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 KRTAP2-3P0C7H8 128 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ELOF1P60002 83 aaKnown RBP0.19□□□□□ -2.38
HDAC9-205ENST00000411993 HIST1H1AQ02539 215 aaPredicted RBP0.19□□□□□ -2.38
HDAC9-205ENST00000411993 NDUFA11Q86Y39 141 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 IFI27L1Q96BM0 104 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 KRTAP2-4Q9BYR9 128 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 KRTAP2-1Q9BYU5 128 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 SMIM3Q9BZL3 60 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 GSKIPQ9P0R6 139 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ERG28Q9UKR5 140 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 OVOS2A0A0J9YW53 1432 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 OVOS2Q6IE36 1432 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 CASZ1Q86V15 1759 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ARHGEF10O15013 1369 aa0.19□□□□□ -2.38
HDAC9-205ENST00000411993 ASH1LQ9NR48 2969 aaKnown RBP0.18□□□□□ -2.38
HDAC9-205ENST00000411993 FAM236AA0A1B0GUQ0 79 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 FAM236BA0A1B0GV22 79 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 RBAKDNA6NC62 111 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 MCRIP1C9JLW8 97 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 CCDC179H3BU77 68 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 M0R129 80 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 M0R2Z0 102 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 IGLC6P0CF74 106 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 EMX2Q04743 252 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 OR2T2Q6IF00 324 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 PRR15LQ9BU68 103 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 SAR1AQ9NR31 198 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 PLXNA2O75051 1894 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
HDAC9-205ENST00000411993 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 PTPRMP28827 1452 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 TRAV12-3A0A0B4J271 114 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 DISP2A7MBM2 1401 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 K7ERU9 68 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 COX4I1P13073 169 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 NPC2P61916 151 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 SPCS2Q15005 226 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 LINC01545Q5VT33 79 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 MIC13Q5XKP0 118 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 RPL7L1Q6DKI1 246 aaKnown RBP0.17□□□□□ -2.38
HDAC9-205ENST00000411993 VMO1Q7Z5L0 202 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 CTAGE3PQ8IX95 158 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 C4orf33Q8N1A6 199 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 TSTD1Q8NFU3 115 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 VSTM2AQ8TAG5 236 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 MAFIPQ8WZ33 124 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 TANC1Q9C0D5 1861 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 BPESC1Q9GZL8 116 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 PROK2Q9HC23 129 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 NDUFA12Q9UI09 145 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 ABCA1O95477 2261 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 KIF13AQ9H1H9 1805 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 MEGF8Q7Z7M0 2845 aa0.17□□□□□ -2.38
HDAC9-205ENST00000411993 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
HDAC9-205ENST00000411993 MAP2P11137 1827 aaKnown RBP0.16□□□□□ -2.38
HDAC9-205ENST00000411993 TNCP24821 2201 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms