RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PPP1R17O96001 155 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 ZNF688P0C7X2 276 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 EDN2P20800 178 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 IFI27P40305 119 aaPredicted RBP5.59□□□□□ -1.51
CXCR4-202ENST00000409817 SSTP61278 116 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 ANXA2RQ3ZCQ2 193 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 HIST2H2BCQ6DN03 193 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 FAM159AQ6UWV7 190 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 C14orf144Q96I85 54 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 MIEN1Q9BRT3 115 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 PHLDA3Q9Y5J5 127 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 TRAV9-2A0A087WT02 112 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 NXPH4O95158 308 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 NPYP01303 97 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 HBDP02042 147 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 CDKN1BP46527 198 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 KLHL30-AS1Q8NEE0 82 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 ZNF418Q8TF45 676 aaPredicted RBP5.58□□□□□ -1.52
CXCR4-202ENST00000409817 ZNF747Q9BV97 191 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 APCP25054 2843 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 TRAV25A0A0B4J276 109 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 A8MTW9 85 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 K7EMI3 77 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 M0R381 172 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 EVI2AP22794 236 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 TFPI2P48307 235 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 SPATA45Q537H7 98 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 OR2K2Q8NGT1 345 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 AP1S3Q96PC3 154 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 CELSR2Q9HCU4 2923 aa5.58□□□□□ -1.52
CXCR4-202ENST00000409817 LOC389332A0A1B0GUA5 103 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 RNASE3P12724 160 aaKnown RBP5.57□□□□□ -1.52
CXCR4-202ENST00000409817 DEFB1P60022 68 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 FHL3Q13643 280 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 ADAMTSL5Q6ZMM2 481 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
CXCR4-202ENST00000409817 Q6ZSN1 163 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 Q8N8P6 123 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 DYNLRB2Q8TF09 96 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 SPAG8Q99932 426 aaPredicted RBP5.57□□□□□ -1.52
CXCR4-202ENST00000409817 ESM1Q9NQ30 184 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 CENPEQ02224 2701 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 ITPR3Q14573 2671 aa5.57□□□□□ -1.52
CXCR4-202ENST00000409817 CHD6Q8TD26 2715 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 CSMD2Q7Z408 3487 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 OR4C46A6NHA9 309 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CXCR4-202ENST00000409817 SMKR1H3BMG3 65 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 NCR2O95944 276 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 HLA-DRB4P13762 266 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 HILS1P60008 231 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 DEFB136Q30KP8 78 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 LINC01545Q5VT33 79 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 Q6ZQT7 251 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 POM121L12Q8N7R1 296 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 C20orf78Q9BR46 151 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 ST20Q9HBF5 79 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
CXCR4-202ENST00000409817 HLA-DRB4X5D2U9 266 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 A0A096LNJ9 63 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 NDUFA7O95182 113 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 IGLC3P0DOY3 106 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 FCER1GP30273 86 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 DEFB114Q30KQ6 69 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 AMTNQ6UX39 209 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 NRACQ8N912 160 aa5.56□□□□□ -1.52
CXCR4-202ENST00000409817 DLX4Q92988 240 aaPredicted RBP5.56□□□□□ -1.52
CXCR4-202ENST00000409817 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 ZFHX3Q15911 3703 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 IGLV2-18A0A075B6J9 118 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 TRGV11A0A075B6L2 103 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 IGHV1OR15-1A0A075B7D0 117 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 TRAV12-3A0A0B4J271 114 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 M0R143 59 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 GNRH2O43555 120 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 CD7P09564 240 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 SMIM17P0DL12 118 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 LGALS9BQ3B8N2 356 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 LGALS9CQ6DKI2 356 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 LINC00173Q6ZV60 143 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 TMEM61Q8N0U2 210 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 CCDC168Q8NDH2 2452 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 LINC01006Q8NI28 216 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 C9orf85Q96MD7 179 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 ZANQ9Y493 2812 aa5.55□□□□□ -1.52
CXCR4-202ENST00000409817 TEX15Q9BXT5 2789 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 LINC01549A6NIU2 74 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 CCL24O00175 119 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 CMC4P56277 68 aaPredicted RBP5.54□□□□□ -1.52
CXCR4-202ENST00000409817 DEFB131AP59861 70 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 RPL32P62910 135 aaKnown RBP5.54□□□□□ -1.52
CXCR4-202ENST00000409817 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 TIMM8BQ9Y5J9 83 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms