RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.83
MCF2L-209ENST00000397036 PKD1L1Q8TDX9 2849 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 CBY3A6NI87 242 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 SNURFLB1AK76 121 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 H3BVH4 76 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 TRGC2P03986 189 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 APOC4P55056 127 aa9.89□□□□□ -0.83
MCF2L-209ENST00000397036 KPRPQ5T749 579 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-209ENST00000397036 CAMPP49913 170 aa9.88□□□□□ -0.83
MCF2L-209ENST00000397036 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
MCF2L-209ENST00000397036 TMEM191AQ9H0A3 160 aa9.88□□□□□ -0.83
MCF2L-209ENST00000397036 MDFICQ9P1T7 246 aa9.88□□□□□ -0.83
MCF2L-209ENST00000397036 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
MCF2L-209ENST00000397036 G3V4G9 280 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 TWIST1Q15672 202 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 ZFP82Q8N141 532 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 OR10AG1Q8NH19 301 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 SPXQ9BT56 116 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 TMEM208Q9BTX3 173 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
MCF2L-209ENST00000397036 RAB5BP61020 215 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
MCF2L-209ENST00000397036 SMIM9A6NGZ8 99 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 APCSP02743 223 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 RAB4BP61018 213 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 TMEM263Q8WUH6 116 aaKnown RBP9.86□□□□□ -0.83
MCF2L-209ENST00000397036 MSRB1Q9NZV6 116 aa9.86□□□□□ -0.83
MCF2L-209ENST00000397036 Q6ZWC4 215 aa9.85□□□□□ -0.83
MCF2L-209ENST00000397036 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
MCF2L-209ENST00000397036 SYT8Q8NBV8 401 aa9.85□□□□□ -0.83
MCF2L-209ENST00000397036 RNASE8Q8TDE3 154 aaKnown RBP9.85□□□□□ -0.83
MCF2L-209ENST00000397036 FRZBQ92765 325 aa9.85□□□□□ -0.83
MCF2L-209ENST00000397036 NOTCH1P46531 2555 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 MUC21A0A0G2JKD1 596 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 MUC21A0A140T8X8 626 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 M0R2P5 195 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 SLAQ13239 276 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 DNAH3Q8TD57 4116 aa9.84□□□□□ -0.83
MCF2L-209ENST00000397036 SPRY2O43597 315 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 HTN1P15515 57 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 AZU1P20160 251 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
MCF2L-209ENST00000397036 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 MUC4Q99102 2169 aa9.83□□□□□ -0.84
MCF2L-209ENST00000397036 M0R381 172 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-209ENST00000397036 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 RASL10AQ92737 203 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 AP1S3Q96PC3 154 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 OVOL2Q9BRP0 275 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 GSN-AS1Q9NRJ2 163 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 TIMM8BQ9Y5J9 83 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-209ENST00000397036 IGHV3OR16-12A0A075B7B8 117 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 PPBPP02775 128 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 RAB4AP20338 218 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 EVI2AP22794 236 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 RNF185Q96GF1 192 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 KIF25-AS1Q9Y6Z4 181 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 U3KQK5 164 aa9.82□□□□□ -0.84
MCF2L-209ENST00000397036 PRM2P04554 102 aa9.81□□□□□ -0.84
MCF2L-209ENST00000397036 SSTP61278 116 aa9.81□□□□□ -0.84
MCF2L-209ENST00000397036 COA6Q5JTJ3 125 aaKnown RBP9.81□□□□□ -0.84
MCF2L-209ENST00000397036 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
MCF2L-209ENST00000397036 RNF183Q96D59 192 aa9.81□□□□□ -0.84
MCF2L-209ENST00000397036 ALKBH7Q9BT30 221 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-209ENST00000397036 TP53TG1Q9Y2A0 90 aa9.81□□□□□ -0.84
MCF2L-209ENST00000397036 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
MCF2L-209ENST00000397036 A8MWV9 139 aa9.8□□□□□ -0.84
MCF2L-209ENST00000397036 LINC00315P59091 139 aa9.8□□□□□ -0.84
MCF2L-209ENST00000397036 Q0VG73 95 aa9.8□□□□□ -0.84
MCF2L-209ENST00000397036 MRPL51Q4U2R6 128 aaKnown RBP9.8□□□□□ -0.84
MCF2L-209ENST00000397036 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
MCF2L-209ENST00000397036 X6R8D5 127 aa9.8□□□□□ -0.84
MCF2L-209ENST00000397036 CRYGDP07320 174 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms